Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   AAYR29_RS00765 Genome accession   NZ_CP154918
Coordinates   103500..104210 (+) Length   236 a.a.
NCBI ID   WP_015714539.1    Uniprot ID   -
Organism   Bacillus subtilis strain FUA2231     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 98500..109210
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYR29_RS00745 (AAYR29_00745) ytfP 98979..100241 (-) 1263 WP_003229222.1 NAD(P)/FAD-dependent oxidoreductase -
  AAYR29_RS00750 (AAYR29_00750) murJ 100445..102079 (+) 1635 WP_015251430.1 lipid II flippase MurJ -
  AAYR29_RS00755 (AAYR29_00755) rsuA 102148..102867 (+) 720 WP_029318266.1 pseudouridine synthase -
  AAYR29_RS00760 (AAYR29_00760) ytzE 102989..103210 (-) 222 WP_003152337.1 DeoR family transcriptional regulator -
  AAYR29_RS00765 (AAYR29_00765) pptA 103500..104210 (+) 711 WP_015714539.1 ABC transporter ATP-binding protein Regulator
  AAYR29_RS00770 (AAYR29_00770) ythQ 104207..105364 (+) 1158 WP_032722356.1 ABC transporter permease -
  AAYR29_RS00775 (AAYR29_00775) pbuO 105403..106701 (-) 1299 WP_014480583.1 hypoxanthine/guanine permease PbuO -
  AAYR29_RS00780 (AAYR29_00780) pepV 106798..108189 (+) 1392 WP_014477689.1 dipeptidase PepV -
  AAYR29_RS00785 (AAYR29_00785) cysK 108223..109158 (-) 936 WP_003229237.1 cysteine synthase A -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 26573.65 Da        Isoelectric Point: 5.5930

>NTDB_id=894901 AAYR29_RS00765 WP_015714539.1 103500..104210(+) (pptA) [Bacillus subtilis strain FUA2231]
MTNLLEASIEQAGYTSRKKVLTDVFLEVRKGELVGLIGANGAGKSTAIKAILGLSEDFKGHIAWNDCSFAYIPEHPSFYE
ELTLWEHLDLISTLHGIEEREFAHRAQSLLQTFSLDHVKHELPVTFSKGMQQKLMLIQAFLSKPDMYVIDEPFIGLDPIS
TKRFVDMLKAEKERGAGILMCTHVLDTAEKICDRFYMIEKGSLFLQGTLKDIQDKTGLEGQSLLDCFYKAVQGDRP

Nucleotide


Download         Length: 711 bp        

>NTDB_id=894901 AAYR29_RS00765 WP_015714539.1 103500..104210(+) (pptA) [Bacillus subtilis strain FUA2231]
TTGACAAATTTGCTTGAAGCTTCAATAGAACAGGCCGGGTATACAAGCCGAAAAAAAGTGCTCACCGATGTTTTTCTGGA
AGTCAGAAAAGGGGAACTGGTTGGACTGATCGGAGCTAACGGCGCCGGAAAAAGCACCGCAATCAAGGCGATACTCGGCC
TTTCAGAAGATTTTAAAGGGCATATTGCCTGGAACGACTGTTCATTTGCATATATTCCGGAGCATCCGTCCTTCTACGAA
GAACTGACGCTGTGGGAGCATTTGGATCTGATCAGCACACTCCACGGCATTGAAGAGAGGGAATTTGCGCATCGGGCCCA
AAGCTTGCTGCAGACGTTTTCGCTAGATCATGTCAAACATGAGCTGCCTGTCACCTTTTCGAAGGGCATGCAGCAAAAAC
TAATGCTTATCCAGGCCTTTCTCTCTAAGCCGGATATGTATGTGATTGATGAACCGTTTATCGGCCTTGATCCGATATCG
ACGAAACGCTTTGTGGACATGCTTAAGGCTGAAAAAGAACGTGGAGCCGGAATTCTTATGTGCACGCATGTACTCGATAC
CGCGGAAAAAATCTGTGACCGGTTTTATATGATTGAGAAAGGTTCATTATTTCTCCAAGGCACGTTAAAAGATATTCAGG
ACAAGACCGGATTAGAGGGGCAGTCATTGCTTGACTGTTTTTATAAGGCAGTTCAAGGTGATCGGCCATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

44.017

99.153

0.436
  pptA Streptococcus thermophilus LMD-9

43.59

99.153

0.432