Detailed information NTG0894894

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AAYR26_RS21520
• Genome accession: NZ_CP154901
• Coordinates: 4014921..4016039 (-)
• Length: 372 a.a.
• NCBI ID: WP_003179978.1
• Uniprot ID: Q65M68
• Organism: Bacillus licheniformis strain FUA2146
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 4009921..4021039

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYR26_RS21505 (AAYR26_21510)	aroD	4011186..4011950 (-)	765	WP_003179983.1	type I 3-dehydroquinate dehydratase	-
AAYR26_RS21510 (AAYR26_21515)	-	4012338..4012556 (-)	219	WP_003179982.1	hypothetical protein	-
AAYR26_RS21515 (AAYR26_21520)	-	4012803..4014128 (-)	1326	WP_009329004.1	TGS domain-containing protein	-
AAYR26_RS21520 (AAYR26_21525)	rapC	4014921..4016039 (-)	1119	WP_003179978.1	Rap family tetratricopeptide repeat protein	Regulator
AAYR26_RS21525 (AAYR26_21530)	-	4016365..4017924 (+)	1560	WP_011197679.1	T7SS effector LXG polymorphic toxin	-
AAYR26_RS21530 (AAYR26_21535)	-	4017941..4018381 (+)	441	WP_009329006.1	DUF6756 family protein	-
AAYR26_RS21535 (AAYR26_21540)	-	4018612..4018908 (-)	297	WP_011201595.1	DUF3800 domain-containing protein	-
AAYR26_RS21540 (AAYR26_21545)	-	4019174..4020898 (+)	1725	WP_003179977.1	T7SS effector LXG polymorphic toxin	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43946.57 Da
• Isoelectric Point: 6.5966

>NTDB_id=894894 AAYR26_RS21520 WP_003179978.1 4014921..4016039(-) (rapC) [Bacillus licheniformis strain FUA2146]
METIPSSEVGIKINRWYNEIQKLNVIEAERLKAEVHLAIERMEEDQDLLSYYQLMNFRHELMLEYLFPAEKKLSKSDYLR
EIEGQGRKLSGLLEYYFSFFTGMYHFSRGKYIKAIKAYRAAEKKLTKVSDKIEKAEFYYKMAEVFYHMKQTHMSMYYVSL
AYDIYKSYDAYVIRRINCLFVVAGNYIDLSTHDQALPHLLSAKESAEDIQNKAIVAKALLNVAYCYNAMERPTKAIEYFH
KAIDVAKEIKAKELTQAYYDLALIHFRNNENIEGRKFYEKALESARVFEDELFLCLLDVLEALFIKSANKSEVLETMKPL
RDSRGYPYLEELALEAALFYTRNERPNDSIFFYDQMVQAQKQIKRGDFLYEI

Nucleotide

• Length: 1119 bp

>NTDB_id=894894 AAYR26_RS21520 WP_003179978.1 4014921..4016039(-) (rapC) [Bacillus licheniformis strain FUA2146]
TTGGAGACTATCCCGTCTTCAGAAGTTGGAATCAAAATAAACCGCTGGTACAACGAAATTCAAAAATTAAACGTAATAGA
AGCAGAACGATTAAAGGCGGAAGTTCACTTAGCTATAGAAAGAATGGAAGAAGATCAGGACTTGCTTTCCTATTATCAGC
TTATGAATTTTAGACATGAGTTAATGTTGGAATATCTTTTCCCGGCAGAAAAAAAGCTGAGCAAATCTGATTATCTTAGG
GAAATTGAGGGACAGGGAAGAAAATTGTCAGGCTTGCTCGAATACTATTTTTCCTTTTTCACCGGAATGTATCATTTTTC
TCGCGGAAAATACATAAAGGCAATCAAGGCATATAGAGCAGCAGAAAAAAAGTTGACGAAAGTTTCAGATAAAATAGAAA
AGGCTGAATTCTATTATAAGATGGCGGAAGTGTTTTATCATATGAAACAGACTCATATGTCAATGTATTATGTGTCTCTC
GCTTATGATATTTATAAATCCTATGATGCATATGTGATTCGAAGAATTAATTGTCTATTCGTTGTTGCTGGGAATTACAT
TGATTTATCAACCCATGATCAAGCTTTACCGCATCTTTTAAGCGCTAAGGAATCCGCGGAAGACATTCAAAACAAGGCGA
TCGTTGCAAAGGCTCTTTTAAATGTAGCATATTGTTATAATGCAATGGAGAGACCAACAAAAGCTATTGAATACTTTCAT
AAGGCGATTGATGTAGCAAAGGAAATAAAGGCAAAAGAACTGACTCAGGCTTATTATGATTTGGCATTAATTCACTTTCG
AAATAACGAAAATATTGAAGGACGAAAATTTTATGAAAAGGCGCTTGAAAGTGCGCGGGTATTTGAAGATGAATTATTCC
TGTGTCTGTTGGATGTTTTAGAGGCACTGTTTATAAAATCAGCTAATAAGTCAGAGGTACTAGAAACAATGAAACCATTA
CGGGATAGTCGTGGTTACCCCTATCTTGAGGAACTGGCATTAGAAGCAGCTCTATTCTATACTAGGAATGAGCGGCCAAA
TGATTCCATATTTTTTTATGATCAGATGGTGCAGGCTCAGAAACAAATCAAAAGGGGCGACTTTCTGTATGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (3-64)

• Tetratricopeptide repeat (TPR_12) (215-285)

3D structure

• AlphaFold DB: Q65M68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.5	100	0.379
rapF	Bacillus subtilis subsp. subtilis str. 168	36.702	100	0.371