Detailed information NTG0894891

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AAYR26_RS20870
• Genome accession: NZ_CP154901
• Coordinates: 3884108..3885226 (-)
• Length: 372 a.a.
• NCBI ID: WP_016886159.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain FUA2146
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3879108..3890226

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYR26_RS20840 (AAYR26_20845)	-	3879817..3881043 (-)	1227	WP_009328954.1	DNA repair exonuclease	-
AAYR26_RS20845 (AAYR26_20850)	-	3881163..3882431 (-)	1269	WP_016886156.1	ABC transporter permease	-
AAYR26_RS20850 (AAYR26_20855)	-	3882424..3883320 (-)	897	WP_003180230.1	ABC transporter ATP-binding protein	-
AAYR26_RS20855 (AAYR26_20860)	-	3883438..3883623 (+)	186	WP_003180228.1	YhzD family protein	-
AAYR26_RS20860 (AAYR26_20865)	-	3883698..3883976 (-)	279	WP_016886157.1	hypothetical protein	-
AAYR26_RS20865 (AAYR26_20870)	-	3883981..3884118 (-)	138	WP_016886158.1	hypothetical protein	-
AAYR26_RS20870 (AAYR26_20875)	rapC	3884108..3885226 (-)	1119	WP_016886159.1	Rap family tetratricopeptide repeat protein	Regulator
AAYR26_RS20875 (AAYR26_20880)	-	3885353..3886129 (-)	777	WP_016886160.1	enoyl-CoA hydratase	-
AAYR26_RS20880 (AAYR26_20885)	-	3886330..3886659 (+)	330	WP_016886161.1	hypothetical protein	-
AAYR26_RS20885 (AAYR26_20890)	-	3886724..3887221 (+)	498	WP_003180220.1	cation:proton antiporter regulatory subunit	-
AAYR26_RS20890 (AAYR26_20895)	-	3887228..3888439 (+)	1212	WP_016886162.1	cation:proton antiporter	-
AAYR26_RS20895 (AAYR26_20900)	-	3888521..3890026 (-)	1506	WP_044822269.1	coproporphyrinogen III oxidase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43238.92 Da
• Isoelectric Point: 5.3717

>NTDB_id=894891 AAYR26_RS20870 WP_016886159.1 3884108..3885226(-) (rapC) [Bacillus licheniformis strain FUA2146]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENQDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAELKVSALEDEVEKAEFYYKLAEIYYYISQRYLSINYATL
ASDIFNRDETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLSILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=894891 AAYR26_RS20870 WP_016886159.1 3884108..3885226(-) (rapC) [Bacillus licheniformis strain FUA2146]
TTGAAACAAAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCAGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACTAAAAGTCAGCGCATTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTGGCGGAAATCTACTACTATATCAGCCAGAGATACTTATCGATCAACTATGCGACGCTC
GCTTCCGACATTTTCAACCGGGATGAGACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGCAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCAAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCGTCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAGCATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

• Tetratricopeptide repeat (TPR_12) (195-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374