NTDB

Overview

Name	amiD	Type	Regulator
Locus tag	AAYR26_RS19965	Genome accession	NZ_CP154901
Coordinates	3699720..3700637 (-)	Length	305 a.a.
NCBI ID	WP_003180613.1	Uniprot ID	A0AA90ETR0
Organism	Bacillus licheniformis strain FUA2146
Function	internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3694720..3705637

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYR26_RS19935 (AAYR26_19940)	-	3695143..3695271 (-)	129	Protein_3800	hypothetical protein	-
AAYR26_RS19940 (AAYR26_19945)	-	3695447..3696109 (+)	663	WP_009328832.1	TerC family protein	-
AAYR26_RS19945 (AAYR26_19950)	spxA	3696332..3696727 (-)	396	WP_009328833.1	transcriptional regulator SpxA	-
AAYR26_RS19950 (AAYR26_19955)	-	3696905..3697483 (-)	579	WP_003180619.1	GNAT family N-acetyltransferase	-
AAYR26_RS19955 (AAYR26_19960)	-	3697714..3698637 (-)	924	WP_011197769.1	ATP-binding cassette domain-containing protein	-
AAYR26_RS19960 (AAYR26_19965)	-	3698639..3699715 (-)	1077	WP_151025719.1	ABC transporter ATP-binding protein	-
AAYR26_RS19965 (AAYR26_19970)	amiD	3699720..3700637 (-)	918	WP_003180613.1	ABC transporter permease	Regulator
AAYR26_RS19970 (AAYR26_19975)	-	3700642..3701577 (-)	936	WP_003180611.1	ABC transporter permease	-
AAYR26_RS19975 (AAYR26_19980)	-	3701673..3703298 (-)	1626	WP_163071751.1	peptide ABC transporter substrate-binding protein	-
AAYR26_RS19980 (AAYR26_19985)	trpS	3704036..3705028 (+)	993	WP_003180607.1	tryptophan--tRNA ligase	-

Sequence

Protein

Download Length: 305 a.a. Molecular weight: 33952.29 Da Isoelectric Point: 8.8249

                                >NTDB_id=894877 AAYR26_RS19965 WP_003180613.1 3699720..3700637(-) (amiD) [Bacillus licheniformis strain FUA2146]

MQQIPKDMFEPAAVDHSEAEKISKKNLSFWTDVFLRFKENKLALFGLVVLILIALMAIFAPVFSSFQYEETDLTNANQPP

SGEHWFGTDDLGRDVFVRTWVGARISLTIGLAAALIDVLIGVIWGAISGIRGGRTDEIMMRIADILWAIPSLLMTILLLV

VMGKGLITMIVAMVITGWINMARIVRGQVLQLKNQEFVLASRTLGAKNSRIIRKHLLPNIMSPILVTMTLTVPTAIFYEA

FLSYLGLGVPQPLASWGTMATDGVQGLEYYPWRLFFPATFICLTMFAFNVIGDGLRDALDPKLRK

Nucleotide

Download Length: 918 bp

                                >NTDB_id=894877 AAYR26_RS19965 WP_003180613.1 3699720..3700637(-) (amiD) [Bacillus licheniformis strain FUA2146]

ATGCAGCAAATACCAAAAGACATGTTTGAACCTGCAGCTGTTGACCATAGCGAAGCCGAAAAGATCTCAAAGAAAAACCT

TTCTTTTTGGACAGACGTATTCTTGAGATTTAAAGAAAACAAGCTGGCGCTGTTTGGACTGGTGGTTCTGATCCTGATCG

CTCTGATGGCTATCTTCGCGCCGGTGTTCTCAAGCTTTCAATATGAAGAAACAGATTTAACGAATGCGAACCAGCCGCCA

AGCGGTGAGCACTGGTTTGGAACAGATGACCTTGGAAGGGACGTATTCGTCCGTACATGGGTCGGCGCCCGCATCTCGCT

GACAATCGGACTCGCTGCTGCGCTGATCGACGTTTTGATCGGTGTGATATGGGGTGCGATTTCCGGCATCAGAGGCGGAC

GTACGGATGAAATTATGATGAGAATAGCAGATATTTTATGGGCGATTCCTTCTTTATTAATGACCATCCTGCTGCTCGTT

GTTATGGGAAAAGGCCTGATCACGATGATCGTGGCGATGGTTATTACGGGCTGGATCAACATGGCGAGAATCGTCCGGGG

CCAAGTACTCCAGCTTAAAAATCAGGAGTTCGTACTCGCCTCAAGAACATTGGGAGCGAAAAACTCGCGCATTATCAGAA

AGCACCTGCTGCCCAACATCATGAGCCCGATCTTGGTCACCATGACATTAACCGTTCCTACGGCTATTTTCTATGAGGCG

TTTTTAAGCTACCTCGGCCTCGGGGTTCCGCAGCCGCTTGCAAGCTGGGGAACGATGGCAACAGACGGTGTTCAGGGATT

GGAATACTACCCTTGGCGCCTGTTCTTCCCGGCTACTTTTATCTGTCTGACCATGTTTGCATTCAACGTTATCGGCGACG

GACTGCGCGACGCTTTAGATCCGAAGCTGCGTAAATAA

Domains

Predicted by InterProScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(121-305)

N-terminal TM domain of oligopeptide transport permease C (OppC_N)

(28-80)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0AA90ETR0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
amiD	Streptococcus salivarius strain HSISS4	35.922	100	0.364
amiD	Streptococcus thermophilus LMG 18311	35.599	100	0.361
amiD	Streptococcus thermophilus LMD-9	35.599	100	0.361

Detailed information NTG0894877