Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   AAYR26_RS16220 Genome accession   NZ_CP154901
Coordinates   3009461..3010084 (+) Length   207 a.a.
NCBI ID   WP_003182222.1    Uniprot ID   Q65J42
Organism   Bacillus licheniformis strain FUA2146     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3004461..3015084
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYR26_RS16185 (AAYR26_16195) - 3004725..3004886 (+) 162 WP_202604361.1 aspartyl-phosphate phosphatase Spo0E family protein -
  AAYR26_RS16190 (AAYR26_16200) - 3004967..3005185 (-) 219 WP_003182236.1 YneF family protein -
  AAYR26_RS16195 (AAYR26_16205) sirA 3005270..3005707 (-) 438 WP_003182234.1 sporulation inhibitor of replication protein SirA -
  AAYR26_RS16200 (AAYR26_16210) recP/tkt 3005862..3007865 (-) 2004 WP_009328229.1 transketolase Machinery gene
  AAYR26_RS16205 (AAYR26_16215) - 3008032..3008265 (-) 234 WP_003182231.1 DUF896 domain-containing protein -
  AAYR26_RS16210 (AAYR26_16220) - 3008331..3008978 (-) 648 WP_003182227.1 recombinase family protein -
  AAYR26_RS16215 (AAYR26_16225) yneA 3008997..3009308 (-) 312 WP_003182225.1 cell division suppressor protein YneA -
  AAYR26_RS16220 (AAYR26_16230) dinR/lexA 3009461..3010084 (+) 624 WP_003182222.1 transcriptional repressor LexA Regulator
  AAYR26_RS16225 (AAYR26_16235) nucA/comI 3010280..3010708 (-) 429 WP_003182220.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  AAYR26_RS16230 (AAYR26_16240) - 3011067..3011906 (-) 840 WP_003182218.1 thymidylate synthase -
  AAYR26_RS16235 (AAYR26_16245) - 3011966..3012727 (-) 762 WP_003182215.1 hypothetical protein -
  AAYR26_RS16240 (AAYR26_16250) - 3012818..3013651 (-) 834 WP_003182213.1 prohibitin family protein -
  AAYR26_RS16245 (AAYR26_16255) - 3013644..3013784 (-) 141 WP_003182211.1 hypothetical protein -
  AAYR26_RS16250 (AAYR26_16260) wrbA 3014105..3014716 (-) 612 WP_011198006.1 NAD(P)H:quinone oxidoreductase -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23263.85 Da        Isoelectric Point: 5.3807

>NTDB_id=894845 AAYR26_RS16220 WP_003182222.1 3009461..3010084(+) (dinR/lexA) [Bacillus licheniformis strain FUA2146]
MTKLSKRQLDILRFIKEEVKRKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDTEEEIHIPKN
QVVNVPVIGKVTAGTPITAVENIEEYFPLPERLAPPDEHVFMLEIMGESMIDAGILDQDYVIVKQQNTANNGDIVVAMTE
DDEATVKRFFKEETHIRLQPENPTMEPIILQNVTILGKVIGVFRTVH

Nucleotide


Download         Length: 624 bp        

>NTDB_id=894845 AAYR26_RS16220 WP_003182222.1 3009461..3010084(+) (dinR/lexA) [Bacillus licheniformis strain FUA2146]
ATGACGAAGCTATCAAAAAGACAACTTGATATTTTGCGTTTCATTAAAGAAGAAGTGAAGCGCAAAGGCTATCCGCCTTC
CGTCAGGGAGATCGGAGAAGCGGTCGGCCTGGCGTCAAGTTCAACGGTACACGGCCACTTGGCAAGGCTTGAAACGAAGG
GATTGATCAGAAGGGATCCGACGAAGCCGAGAGCGATCGAAATTCTCGATACAGAGGAGGAAATTCATATTCCGAAAAAC
CAGGTTGTCAATGTCCCGGTCATCGGAAAGGTGACCGCCGGTACACCGATTACCGCAGTCGAAAACATCGAGGAATACTT
TCCGCTTCCCGAACGCCTGGCGCCGCCGGATGAGCACGTCTTCATGCTGGAGATCATGGGAGAAAGCATGATCGATGCCG
GAATTCTTGATCAAGATTATGTGATTGTCAAGCAGCAGAACACCGCAAACAACGGGGATATCGTCGTTGCGATGACCGAA
GACGACGAAGCGACTGTTAAGCGGTTTTTCAAGGAGGAAACCCATATCCGCCTTCAGCCGGAAAACCCGACGATGGAGCC
GATCATCCTTCAGAATGTGACGATTCTCGGAAAAGTCATCGGCGTTTTTCGCACTGTTCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-200)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65J42

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

91.304

100

0.913