Detailed information NTG0894834

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AAYR26_RS12855
• Genome accession: NZ_CP154901
• Coordinates: 2415879..2417009 (+)
• Length: 376 a.a.
• NCBI ID: WP_026699173.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain FUA2146
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2410879..2422009

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYR26_RS12835 (AAYR26_12845)	lysA	2411561..2412880 (+)	1320	WP_003183141.1	diaminopimelate decarboxylase	-
AAYR26_RS12840 (AAYR26_12850)	-	2413119..2413994 (+)	876	WP_051627645.1	poly-gamma-glutamate hydrolase family protein	-
AAYR26_RS12845 (AAYR26_12855)	-	2413977..2414873 (-)	897	WP_011198086.1	DUF1002 domain-containing protein	-
AAYR26_RS12850 (AAYR26_12860)	-	2415210..2415647 (+)	438	WP_003183133.1	peptidylprolyl isomerase	-
AAYR26_RS12855 (AAYR26_12865)	rapC	2415879..2417009 (+)	1131	WP_026699173.1	Rap family tetratricopeptide repeat protein	Regulator
AAYR26_RS12860 (AAYR26_12870)	-	2416999..2417304 (+)	306	WP_003183128.1	hypothetical protein	-
AAYR26_RS12865 (AAYR26_12875)	-	2417463..2417900 (+)	438	WP_003183127.1	Hsp20/alpha crystallin family protein	-
AAYR26_RS12870 (AAYR26_12880)	-	2418027..2420213 (+)	2187	WP_003183125.1	RNA ligase	-
AAYR26_RS12875 (AAYR26_12885)	-	2420476..2420820 (+)	345	WP_003183123.1	hypothetical protein	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44216.02 Da
• Isoelectric Point: 4.6813

>NTDB_id=894834 AAYR26_RS12855 WP_026699173.1 2415879..2417009(+) (rapC) [Bacillus licheniformis strain FUA2146]
MSVKIPSTAVGVKINDWYNAIRKFNVTDAEMLKAEIEREISQMEEDQDLLLYYALMEFRHRIMLDYVKPLEEGETPPDFS
EILKDIEDEQGKLTGLLEYYFNFFRGMYEYKNHDYIKAISFYRRAEKKLLHVEDEIERAEFHFKMAEVFYHMKQSHVSMN
YALQAIETYQAHETYTVRRIQCEFVIAGNYDDLESNEKALSHLEKALKLSQQEGQLILEGHTYYNLGNCYYKMGDFDQAA
EYFNRAAAIYQEESSDILPKAFFSLALADFKLKQLEKADDALNKGIDIARRSDDAIYLSKFHFLKALYVDDDGRAPMLET
FQLLGSKKMYPDIEDLALEAAEYYNEIGRLSDSVYFYQTVFSARKQMKKGDWSYEI

Nucleotide

• Length: 1131 bp

>NTDB_id=894834 AAYR26_RS12855 WP_026699173.1 2415879..2417009(+) (rapC) [Bacillus licheniformis strain FUA2146]
GTGAGCGTAAAAATCCCATCGACGGCAGTCGGCGTAAAAATTAATGACTGGTATAACGCGATACGTAAATTCAACGTCAC
GGACGCCGAAATGCTGAAGGCAGAAATTGAGCGCGAAATTTCTCAAATGGAAGAGGATCAAGACTTATTATTGTATTACG
CCTTAATGGAATTCAGACACAGAATCATGCTTGATTACGTAAAACCTTTGGAAGAAGGCGAAACCCCGCCTGACTTTTCT
GAAATATTAAAAGATATCGAAGATGAACAAGGAAAGCTGACAGGCCTGCTCGAATATTATTTTAACTTTTTTAGAGGGAT
GTATGAATATAAAAACCATGATTATATTAAAGCGATCTCTTTTTACAGGCGCGCCGAAAAAAAGCTGCTGCACGTCGAGG
ACGAAATAGAGAGAGCCGAGTTTCATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAGAGCCATGTGTCGATGAAC
TATGCGCTTCAAGCGATTGAAACCTATCAGGCGCATGAAACCTACACGGTTCGGAGAATCCAATGCGAGTTCGTCATCGC
AGGGAACTATGACGATTTAGAGTCGAATGAAAAAGCGCTGTCACATCTTGAAAAGGCGCTGAAGCTTTCACAGCAAGAAG
GCCAGCTCATATTGGAAGGACACACCTATTACAATTTGGGAAACTGCTATTATAAGATGGGGGATTTCGATCAGGCAGCC
GAGTACTTCAACAGGGCTGCTGCGATTTATCAAGAAGAGTCATCAGATATTCTTCCAAAAGCGTTTTTCAGTCTTGCACT
TGCAGATTTCAAGTTGAAGCAGCTGGAAAAGGCGGATGACGCGTTAAACAAAGGAATTGACATCGCCCGCCGATCAGACG
ATGCGATCTACCTTTCAAAATTTCATTTTTTAAAAGCTTTGTATGTTGATGATGACGGCAGGGCTCCAATGCTGGAGACA
TTTCAGCTGCTCGGGTCAAAAAAGATGTATCCCGATATTGAGGACTTGGCATTGGAAGCAGCTGAATACTATAATGAAAT
TGGGCGCTTGAGCGACTCTGTTTATTTCTATCAAACGGTATTCAGTGCTCGAAAACAAATGAAAAAAGGGGACTGGTCGT
ATGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (190-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	47.48	100	0.476
rapF	Bacillus subtilis subsp. subtilis str. 168	44.619	100	0.452