Detailed information NTG0894820

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: R3L07_RS14385
• Genome accession: NZ_CP137073
• Coordinates: 2992522..2993223 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain SNUBHAB0197
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2987522..2998223

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3L07_RS14350 (R3L07_14355)	kdsB	2988045..2988806 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
R3L07_RS14355 (R3L07_14360)	-	2988818..2989798 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
R3L07_RS14360 (R3L07_14365)	-	2989810..2990151 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
R3L07_RS14365 (R3L07_14370)	-	2990169..2990942 (+)	774	WP_000497298.1	TatD family hydrolase	-
R3L07_RS14370 (R3L07_14375)	-	2990980..2991588 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
R3L07_RS14375 (R3L07_14380)	-	2991598..2992152 (+)	555	WP_000841373.1	type II secretion system protein	-
R3L07_RS14380 (R3L07_14385)	xcpV	2992142..2992522 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
R3L07_RS14385 (R3L07_14390)	xcpW	2992522..2993223 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
R3L07_RS14390 (R3L07_14395)	gspK	2993223..2994182 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
R3L07_RS14395 (R3L07_14400)	-	2994413..2995009 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
R3L07_RS14400 (R3L07_14405)	ung	2995060..2995773 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
R3L07_RS14405 (R3L07_14410)	-	2995770..2996894 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
R3L07_RS14410 (R3L07_14415)	tadA	2996901..2997404 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
R3L07_RS14415 (R3L07_14420)	-	2997474..2997917 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=894820 R3L07_RS14385 WP_000594589.1 2992522..2993223(+) (xcpW) [Acinetobacter baumannii strain SNUBHAB0197]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=894820 R3L07_RS14385 WP_000594589.1 2992522..2993223(+) (xcpW) [Acinetobacter baumannii strain SNUBHAB0197]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996