Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   AAYR26_RS08245 Genome accession   NZ_CP154901
Coordinates   1579102..1579983 (+) Length   293 a.a.
NCBI ID   WP_009329511.1    Uniprot ID   -
Organism   Bacillus licheniformis strain FUA2146     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 1574102..1584983
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYR26_RS08220 (AAYR26_08230) - 1574460..1575011 (+) 552 WP_003184868.1 isochorismatase family cysteine hydrolase -
  AAYR26_RS08225 (AAYR26_08235) - 1575029..1576498 (+) 1470 WP_003184866.1 nicotinate phosphoribosyltransferase -
  AAYR26_RS08230 (AAYR26_08240) - 1576677..1577897 (+) 1221 WP_003184864.1 HDOD domain-containing protein -
  AAYR26_RS08235 (AAYR26_08245) - 1577940..1578287 (-) 348 WP_231105863.1 SDR family oxidoreductase -
  AAYR26_RS08240 (AAYR26_08250) degQ 1578773..1578913 (+) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  AAYR26_RS08245 (AAYR26_08255) comQ 1579102..1579983 (+) 882 WP_009329511.1 polyprenyl synthetase family protein Regulator
  AAYR26_RS08250 (AAYR26_08260) comX 1579987..1580160 (+) 174 WP_009329510.1 competence pheromone ComX -
  AAYR26_RS08255 (AAYR26_08265) comP 1580162..1582462 (+) 2301 WP_009329509.1 ATP-binding protein Regulator
  AAYR26_RS08260 (AAYR26_08270) comA 1582549..1583187 (+) 639 WP_003184849.1 response regulator transcription factor Regulator
  AAYR26_RS08265 (AAYR26_08275) - 1583204..1583593 (+) 390 WP_009329508.1 hotdog fold thioesterase -
  AAYR26_RS08270 (AAYR26_08280) mnhG 1583633..1584007 (-) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  AAYR26_RS08275 (AAYR26_08285) - 1583991..1584275 (-) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  AAYR26_RS08280 (AAYR26_08290) - 1584275..1584751 (-) 477 WP_003184840.1 Na+/H+ antiporter subunit E -

Sequence


Protein


Download         Length: 293 a.a.        Molecular weight: 33205.04 Da        Isoelectric Point: 4.8239

>NTDB_id=894802 AAYR26_RS08245 WP_009329511.1 1579102..1579983(+) (comQ) [Bacillus licheniformis strain FUA2146]
MNHFIDLEIPNADLNRTLHAFLDAKDQLHFSELAFYHYQSFGGTDTDAAETLGAGIELLILAFDIFDDLEDEDSPDEPWM
KINRSVAMNAATALYTISIKVIGSVSKEPVFFEKLMEYTLQSMQGQHDDLSNRPATEDECLDMIKRKSGALTALPCVLGA
MLATGKFDPTVEKYAYQLGIASQIENDYKALFYDSKSDIAKKKRTLAYLYLSRKFNQPSIDLLKTFETEDKIADKEIKCY
KEKLKAAGVTQYMYVMNQLAIQKFKKGIGELELGELKKQQLTSFVLKMFGKED

Nucleotide


Download         Length: 882 bp        

>NTDB_id=894802 AAYR26_RS08245 WP_009329511.1 1579102..1579983(+) (comQ) [Bacillus licheniformis strain FUA2146]
ATGAATCATTTTATAGACCTTGAGATTCCCAATGCGGACTTAAATCGGACGCTGCACGCTTTTCTAGATGCAAAGGACCA
GTTGCATTTCAGCGAGCTTGCTTTTTATCATTACCAAAGTTTCGGCGGCACGGACACCGATGCGGCAGAAACCCTTGGAG
CAGGCATTGAACTCTTGATTCTTGCGTTTGATATATTCGATGATTTAGAGGATGAAGACAGCCCCGATGAACCTTGGATG
AAAATCAACCGTTCAGTCGCAATGAATGCGGCGACTGCGCTTTATACAATAAGCATTAAAGTGATCGGTTCGGTGTCGAA
AGAACCGGTGTTTTTCGAAAAGCTAATGGAATATACACTTCAATCGATGCAGGGACAGCATGACGATCTCAGCAACCGCC
CTGCCACTGAAGATGAGTGCCTTGACATGATCAAGCGTAAATCCGGGGCGCTGACAGCCTTGCCATGCGTGCTGGGAGCT
ATGCTTGCTACGGGCAAATTTGACCCGACGGTTGAAAAGTACGCCTACCAGCTGGGCATTGCTTCACAAATCGAAAATGA
TTATAAAGCACTTTTTTATGATTCAAAAAGCGATATCGCCAAGAAAAAGCGCACGCTTGCGTACTTATATTTGTCAAGAA
AATTTAACCAGCCGTCGATTGACTTGTTAAAAACATTTGAAACTGAGGATAAAATTGCCGATAAAGAAATAAAATGCTAT
AAAGAGAAATTGAAGGCAGCAGGCGTCACTCAGTATATGTATGTTATGAATCAGCTCGCTATTCAGAAATTTAAGAAGGG
AATCGGGGAGCTGGAGTTGGGGGAGCTGAAAAAACAGCAGTTGACTTCGTTTGTATTGAAGATGTTTGGGAAGGAGGATT
AG

Domains


Predicted by InterProScan.

(41-227)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45.172

98.976

0.447