Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | AAVC70_RS19520 | Genome accession | NZ_CP154898 |
| Coordinates | 3556030..3556392 (+) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens strain Fad 97 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3551030..3561392
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAVC70_RS19490 (AAVC70_19490) | flgD | 3551945..3552376 (+) | 432 | WP_013352262.1 | flagellar hook assembly protein FlgD | - |
| AAVC70_RS19495 (AAVC70_19495) | flgG | 3552401..3553177 (+) | 777 | WP_013352263.1 | flagellar basal body rod protein FlgG | - |
| AAVC70_RS19500 (AAVC70_19500) | - | 3553217..3553432 (+) | 216 | WP_013352264.1 | flagellar FlbD family protein | - |
| AAVC70_RS19505 (AAVC70_19505) | fliL | 3553429..3553848 (+) | 420 | WP_013352265.1 | flagellar basal body-associated protein FliL | - |
| AAVC70_RS19510 (AAVC70_19510) | fliM | 3553882..3554880 (+) | 999 | WP_013352266.1 | flagellar motor switch protein FliM | - |
| AAVC70_RS19515 (AAVC70_19515) | fliY | 3554870..3556003 (+) | 1134 | WP_013352267.1 | flagellar motor switch phosphatase FliY | - |
| AAVC70_RS19520 (AAVC70_19520) | pilH | 3556030..3556392 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| AAVC70_RS19525 (AAVC70_19525) | fliZ | 3556407..3557060 (+) | 654 | WP_013352268.1 | flagella biosynthesis regulatory protein FliZ | - |
| AAVC70_RS19530 (AAVC70_19530) | fliP | 3557053..3557718 (+) | 666 | WP_013352269.1 | flagellar type III secretion system pore protein FliP | - |
| AAVC70_RS19535 (AAVC70_19535) | fliQ | 3557733..3558002 (+) | 270 | WP_013352270.1 | flagellar biosynthesis protein FliQ | - |
| AAVC70_RS19540 (AAVC70_19540) | fliR | 3558009..3558788 (+) | 780 | WP_013352271.1 | flagellar biosynthetic protein FliR | - |
| AAVC70_RS19545 (AAVC70_19545) | flhB | 3558788..3559867 (+) | 1080 | WP_061573891.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=894750 AAVC70_RS19520 WP_003154238.1 3556030..3556392(+) (pilH) [Bacillus amyloliquefaciens strain Fad 97]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=894750 AAVC70_RS19520 WP_003154238.1 3556030..3556392(+) (pilH) [Bacillus amyloliquefaciens strain Fad 97]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCGGACGGAGCACAGGCAGTCGAAAAATTCAAAGAGCATTCACCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACCGCATTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGGCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAGCCATTCCA
AGCAGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCGGACGGAGCACAGGCAGTCGAAAAATTCAAAGAGCATTCACCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACCGCATTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGGCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAGCCATTCCA
AGCAGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |