Detailed information NTG0894731

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: R3L05_RS06085
• Genome accession: NZ_CP137071
• Coordinates: 1247570..1248271 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain SNUBHAB0220
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1242570..1253271

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3L05_RS06055 (R3L05_06070)	-	1242876..1243319 (-)	444	WP_001246675.1	SRPBCC family protein	-
R3L05_RS06060 (R3L05_06075)	tadA	1243389..1243892 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
R3L05_RS06065 (R3L05_06080)	-	1243899..1245023 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
R3L05_RS06070 (R3L05_06085)	ung	1245020..1245733 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
R3L05_RS06075 (R3L05_06090)	-	1245784..1246380 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
R3L05_RS06080 (R3L05_06095)	gspK	1246611..1247570 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
R3L05_RS06085 (R3L05_06100)	xcpW	1247570..1248271 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
R3L05_RS06090 (R3L05_06105)	xcpV	1248271..1248651 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
R3L05_RS06095 (R3L05_06110)	-	1248641..1249195 (-)	555	WP_000841373.1	type II secretion system protein	-
R3L05_RS06100 (R3L05_06115)	-	1249205..1249813 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
R3L05_RS06105 (R3L05_06120)	-	1249851..1250624 (-)	774	WP_000497298.1	TatD family hydrolase	-
R3L05_RS06110 (R3L05_06125)	-	1250642..1250983 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
R3L05_RS06115 (R3L05_06130)	-	1250995..1251975 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
R3L05_RS06120 (R3L05_06135)	kdsB	1251987..1252748 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=894731 R3L05_RS06085 WP_000594589.1 1247570..1248271(-) (xcpW) [Acinetobacter baumannii strain SNUBHAB0220]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=894731 R3L05_RS06085 WP_000594589.1 1247570..1248271(-) (xcpW) [Acinetobacter baumannii strain SNUBHAB0220]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996