Detailed information NTG0894610

Bioinformatically predicted

Overview

• Name: recP/tkt
• Type: Machinery gene
• Locus tag: AAVB98_RS19795
• Genome accession: NZ_CP154895
• Coordinates: 3767758..3769761 (-)
• Length: 667 a.a.
• NCBI ID: WP_013352417.1
• Uniprot ID: A0A9P1JHT7
• Organism: Bacillus amyloliquefaciens strain Fad 77
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3762758..3774761

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAVB98_RS19745 (AAVB98_19745)	sspO	3763206..3763352 (+)	147	WP_003153982.1	acid-soluble spore protein SspO	-
AAVB98_RS19750 (AAVB98_19750)	-	3763382..3763528 (+)	147	WP_003153984.1	small acid-soluble spore protein P	-
AAVB98_RS19755 (AAVB98_19755)	-	3763622..3763993 (+)	372	WP_013352424.1	spore coat protein	-
AAVB98_RS19760 (AAVB98_19760)	-	3764228..3764656 (+)	429	WP_013352423.1	DUF2621 domain-containing protein	-
AAVB98_RS19765 (AAVB98_19765)	-	3764684..3765175 (-)	492	WP_088030532.1	CcdC protein domain-containing protein	-
AAVB98_RS19770 (AAVB98_19770)	pilH	3765255..3765617 (-)	363	WP_013352421.1	response regulator	Machinery gene
AAVB98_RS19775 (AAVB98_19775)	-	3765702..3766409 (-)	708	WP_088030531.1	cytochrome c biogenesis protein CcdA	-
AAVB98_RS19780 (AAVB98_19780)	-	3766611..3766784 (+)	174	WP_088030684.1	aspartyl-phosphate phosphatase Spo0E family protein	-
AAVB98_RS19785 (AAVB98_19785)	-	3766857..3767075 (-)	219	WP_003153994.1	YneF family protein	-
AAVB98_RS19790 (AAVB98_19790)	sirA	3767161..3767607 (-)	447	WP_013352418.1	sporulation inhibitor of replication protein SirA	-
AAVB98_RS19795 (AAVB98_19795)	recP/tkt	3767758..3769761 (-)	2004	WP_013352417.1	transketolase	Machinery gene
AAVB98_RS19800 (AAVB98_19800)	-	3769928..3770161 (-)	234	WP_003153997.1	DUF896 domain-containing protein	-
AAVB98_RS19805 (AAVB98_19805)	-	3770230..3770880 (-)	651	WP_013352416.1	recombinase family protein	-
AAVB98_RS19810 (AAVB98_19810)	yneA	3770896..3771207 (-)	312	WP_013352415.1	cell division suppressor protein YneA	-
AAVB98_RS19815 (AAVB98_19815)	lexA	3771364..3771985 (+)	622	Protein_3844	transcriptional repressor LexA	-
AAVB98_RS19820 (AAVB98_19820)	-	3772334..3772762 (-)	429	WP_013352414.1	hypothetical protein	-
AAVB98_RS19825 (AAVB98_19825)	-	3772919..3773368 (+)	450	WP_013352413.1	YndM family protein	-
AAVB98_RS19830 (AAVB98_19830)	-	3773396..3774226 (-)	831	WP_013352412.1	prohibitin family protein	-
AAVB98_RS19835 (AAVB98_19835)	-	3774213..3774362 (-)	150	WP_013352411.1	hypothetical protein	-

Sequence

Protein

• Length: 667 a.a.
• Molecular weight: 72570.62 Da
• Isoelectric Point: 4.8151

>NTDB_id=894610 AAVB98_RS19795 WP_013352417.1 3767758..3769761(-) (recP/tkt) [Bacillus amyloliquefaciens strain Fad 77]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVNPQNPGWFNRDRFVLSAGHGSMLLYSMLHLSG
YDLSIDDLKQFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLELGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIAELTAAIEKARQNDKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGQEESKLTKEAYAWTFEEDFYVPDEVYAHFNQAVKEAGSKKEQEWNELFAAYQE
KYPELAEQLSLGMKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGIAKKIPFFVGGSADLAGSNKTTIKNAGDFTARDY
AGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLASLMGLPVTYVFTHDSIAVGEDGPTHEPIEQLA
SLRALPNLSVIRPADGNETAAAWKLAVQSQDHPTALVLTRQNLPTIDQQAEEAYAGVEKGAYIVSKAQTDAPDALLLATG
SEVGLAIEAQAKLAEENVHVSVVSMPSWDRFEKQSAEYKNSVLPPNVTKRLAIEMGSSFGWGKFTGLEGDVLAIDRFGAS
APGETIMKEYGFTAENVADRVKKLLNK

Nucleotide

• Length: 2004 bp

>NTDB_id=894610 AAVB98_RS19795 WP_013352417.1 3767758..3769761(-) (recP/tkt) [Bacillus amyloliquefaciens strain Fad 77]
ATGGATACAATTGAAAAGAAATCAGTTGCCACCATACGTACACTGTCTATAGACGCAATTGAAAAAGCTAATTCCGGACA
CCCGGGCATGCCGATGGGAGCCGCTCCGATGGCTTACACGCTGTGGACGAAATTTATGAATGTGAATCCGCAGAATCCAG
GCTGGTTTAACCGCGACCGTTTTGTTTTATCAGCAGGACACGGTTCAATGCTTTTATACAGCATGCTGCATTTAAGCGGA
TATGACCTCAGCATTGATGATCTGAAACAGTTCCGTCAATGGGGAAGCAAAACACCGGGACATCCGGAGTTCGGACATAC
AGCAGGAGTAGACGCAACGACCGGGCCTCTCGGACAGGGTATCGCGATGGCAGTGGGAATGGCAATCGCAGAACGCCATC
TGGCTGAGACATATAACCGTGATTCATTCAACGTAGTTGATCATTATACATACAGTATTTGCGGAGACGGCGATTTGATG
GAAGGCATTTCTTCCGAAGCAGCTTCTCTTGCAGGCCATCTGGAGTTAGGCCGCCTGATCGTATTATACGATTCTAATGA
TATTTCTTTAGACGGTGATTTAGACCGTTCTTTCTCTGAAAATGTAAAACAGCGTTTTGAAGCAATGAACTGGGAAGTCC
TTTATGTTGAGGACGGAAATAACATCGCTGAATTGACGGCTGCAATTGAAAAAGCGCGCCAGAATGATAAAAAACCGACT
TTAATTGAAGTGAAGACCACAATCGGTTTCGGTTCTCCAAACCGCGCGGGTACATCTGGCGTTCACGGCGCTCCATTAGG
ACAAGAAGAGAGCAAGCTGACGAAAGAAGCGTACGCTTGGACATTTGAAGAAGATTTTTATGTTCCGGATGAAGTATACG
CGCATTTCAACCAAGCTGTAAAAGAAGCCGGCTCGAAAAAAGAACAGGAATGGAATGAACTGTTCGCGGCTTATCAAGAA
AAATATCCTGAGCTTGCTGAACAGCTGTCACTCGGAATGAAAGGCGAGCTTCCGAAAGACTGGGATCAGGAAGTTCCTGT
TTATGAAAAAGGCAGCAGTCTTGCTTCCCGCGCATCTTCAGGTGAGGTGCTGAACGGCATCGCTAAGAAAATTCCTTTCT
TTGTCGGGGGATCTGCTGACCTTGCGGGTTCAAACAAAACGACAATCAAAAATGCAGGAGACTTCACGGCCAGAGACTAC
GCCGGGAAAAACTTCTGGTTCGGGGTCCGTGAATTCGCGATGGGCGCTGCTTTAAACGGAATGGCGCTTCACGGCGGCCT
TCGCGTATTCGGCGGCACATTCTTTGTGTTCTCTGACTATTTAAGACCTGCCATTCGTCTGGCGTCATTAATGGGGCTGC
CTGTCACTTATGTATTCACGCATGACAGTATTGCCGTAGGAGAAGACGGACCGACTCACGAACCGATTGAGCAGCTTGCT
TCTTTACGCGCACTTCCTAACCTTTCTGTGATCAGACCTGCTGACGGAAATGAAACCGCAGCTGCGTGGAAGCTTGCCGT
TCAAAGCCAGGATCACCCGACAGCTCTTGTATTGACACGCCAAAACCTGCCGACAATTGATCAGCAGGCTGAAGAAGCGT
ATGCCGGAGTGGAAAAAGGGGCTTATATCGTTTCCAAAGCACAAACGGATGCACCGGACGCACTTCTTTTAGCGACGGGT
TCTGAAGTCGGACTCGCGATTGAAGCTCAGGCGAAGCTTGCTGAAGAAAACGTTCACGTTTCTGTAGTCAGCATGCCGAG
CTGGGACCGCTTCGAAAAACAATCGGCTGAGTACAAAAACAGCGTACTTCCTCCGAACGTAACGAAACGTCTTGCGATTG
AAATGGGATCAAGCTTCGGATGGGGCAAATTTACCGGTCTTGAAGGAGACGTTCTCGCAATTGACCGTTTCGGCGCTTCA
GCTCCGGGAGAAACAATTATGAAAGAATACGGGTTTACTGCAGAAAACGTGGCTGACCGCGTAAAAAAACTGCTAAACAA
ATAA

Domains

Predicted by InterProScan.

• Transketolase, pyrimidine binding domain (Transket_pyr) (354-524)

• Transketolase, thiamine diphosphate binding domain (Transketolase_N) (5-338)

• Transketolase, C-terminal domain (Transketolase_C) (549-657)

3D structure

• AlphaFold DB: A0A9P1JHT7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recP/tkt	Streptococcus pneumoniae TIGR4	55.891	99.25	0.555