Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   AAVB98_RS09505 Genome accession   NZ_CP154895
Coordinates   1793087..1793881 (+) Length   264 a.a.
NCBI ID   WP_013354215.1    Uniprot ID   A0A9P1JLP7
Organism   Bacillus amyloliquefaciens strain Fad 77     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1788087..1798881
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVB98_RS09485 (AAVB98_09485) walR 1788348..1789055 (+) 708 WP_004393104.1 cell wall metabolism DNA-binding response regulator WalR -
  AAVB98_RS09490 (AAVB98_09490) walK 1789062..1790897 (+) 1836 WP_013354218.1 cell wall metabolism sensor histidine kinase WalK -
  AAVB98_RS09495 (AAVB98_09495) yycH 1790887..1792245 (+) 1359 WP_013354217.1 two-component system activity regulator YycH -
  AAVB98_RS09500 (AAVB98_09500) yycI 1792232..1793071 (+) 840 WP_014472401.1 two-component system regulatory protein YycI -
  AAVB98_RS09505 (AAVB98_09505) vicX 1793087..1793881 (+) 795 WP_013354215.1 MBL fold metallo-hydrolase Regulator
  AAVB98_RS09510 (AAVB98_09510) htrA 1793968..1795164 (+) 1197 WP_013354214.1 S1C family serine protease Regulator
  AAVB98_RS09515 (AAVB98_09515) - 1795537..1796448 (-) 912 WP_013354213.1 PepSY domain-containing protein -
  AAVB98_RS09520 (AAVB98_09520) - 1796662..1797345 (+) 684 WP_013354212.1 response regulator transcription factor -
  AAVB98_RS09525 (AAVB98_09525) - 1797342..1798760 (+) 1419 WP_014471292.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29116.16 Da        Isoelectric Point: 5.7992

>NTDB_id=894543 AAVB98_RS09505 WP_013354215.1 1793087..1793881(+) (vicX) [Bacillus amyloliquefaciens strain Fad 77]
MGLQFSVLASGSTGNAFYLETEEHSFLVDAGLSGKAMDGLMEQIGRKIDDVDGIFVTHEHSDHIKGLGVIARKYGLPVYA
NEKTWKAMENQIGKLDTGQKFLFPMESVKSFGGLDVESFGVSHDAAEPMFYVFHYQGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDGTSRIYLAHLSQDNNMKELARMSVQQTLAAK
GFVAGETFQLFDTDPKIPTPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=894543 AAVB98_RS09505 WP_013354215.1 1793087..1793881(+) (vicX) [Bacillus amyloliquefaciens strain Fad 77]
ATGGGCTTGCAATTTAGCGTGCTTGCGAGCGGGAGTACCGGAAACGCGTTTTATCTGGAGACAGAGGAGCACTCCTTTCT
GGTGGATGCCGGCCTGAGCGGAAAAGCGATGGACGGGCTGATGGAGCAAATCGGCCGTAAGATAGACGACGTGGACGGCA
TCTTTGTCACTCATGAGCACAGCGACCATATTAAAGGGCTCGGCGTCATTGCGAGAAAGTACGGTCTTCCGGTATACGCC
AATGAAAAGACGTGGAAAGCGATGGAGAATCAGATCGGCAAGCTGGACACCGGACAAAAGTTTTTGTTCCCGATGGAAAG
CGTGAAATCCTTCGGCGGGCTTGATGTTGAGTCATTCGGCGTCTCTCATGACGCGGCCGAGCCGATGTTCTATGTTTTCC
ACTACCAAGGCAGAAAGCTCGCGCTGATGACGGACACCGGTTATGTGAGCGACAGAATGAAGGGCATTATCCGTTCGGCC
AATGTGTTTGTGTTTGAAAGCAACCATGACGTCGGCATGCTGCAAATGGGCAGATACCCATGGAGCATTAAACGGCGGAT
TTTAAGCGATGTCGGCCACGTCTCAAATGAAGACGCGGCGCTCGCCATGACTGATGTCATCGGCGACGGCACATCACGCA
TCTACTTGGCGCATCTGAGCCAAGACAACAATATGAAGGAACTGGCGAGAATGTCCGTGCAGCAGACATTGGCTGCAAAA
GGATTTGTCGCGGGGGAAACGTTTCAATTATTTGATACCGATCCGAAAATCCCGACGCCTCTGTGCGCCGTGTAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9P1JLP7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

52.852

99.621

0.527