Detailed information NTG0894536

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: R3L11_RS11530
• Genome accession: NZ_CP137059
• Coordinates: 2367541..2368242 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain SNUBHAB0291
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2362541..2373242

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3L11_RS11495 (R3L11_11495)	kdsB	2363064..2363825 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
R3L11_RS11500 (R3L11_11500)	-	2363837..2364817 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
R3L11_RS11505 (R3L11_11505)	-	2364829..2365170 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
R3L11_RS11510 (R3L11_11510)	-	2365188..2365961 (+)	774	WP_000497298.1	TatD family hydrolase	-
R3L11_RS11515 (R3L11_11515)	-	2365999..2366607 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
R3L11_RS11520 (R3L11_11520)	-	2366617..2367171 (+)	555	WP_000841373.1	type II secretion system protein	-
R3L11_RS11525 (R3L11_11525)	xcpV	2367161..2367541 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
R3L11_RS11530 (R3L11_11530)	xcpW	2367541..2368242 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
R3L11_RS11535 (R3L11_11535)	gspK	2368242..2369201 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
R3L11_RS11540 (R3L11_11540)	-	2369432..2370028 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
R3L11_RS11545 (R3L11_11545)	ung	2370079..2370792 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
R3L11_RS11550 (R3L11_11550)	-	2370789..2371913 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
R3L11_RS11555 (R3L11_11555)	tadA	2371920..2372423 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
R3L11_RS11560 (R3L11_11560)	-	2372493..2372936 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=894536 R3L11_RS11530 WP_000594589.1 2367541..2368242(+) (xcpW) [Acinetobacter baumannii strain SNUBHAB0291]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=894536 R3L11_RS11530 WP_000594589.1 2367541..2368242(+) (xcpW) [Acinetobacter baumannii strain SNUBHAB0291]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996