Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   AAVB98_RS08560 Genome accession   NZ_CP154895
Coordinates   1621550..1622632 (-) Length   360 a.a.
NCBI ID   WP_013350793.1    Uniprot ID   A0A9P1NFM6
Organism   Bacillus amyloliquefaciens strain Fad 77     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1616550..1627632
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVB98_RS08535 (AAVB98_08535) cysE 1616648..1617301 (-) 654 WP_003156410.1 serine O-acetyltransferase -
  AAVB98_RS08540 (AAVB98_08540) gltX 1617612..1619063 (-) 1452 WP_014469613.1 glutamate--tRNA ligase -
  AAVB98_RS08545 (AAVB98_08545) ispF 1619155..1619631 (-) 477 WP_013350796.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  AAVB98_RS08550 (AAVB98_08550) ispD 1619624..1620322 (-) 699 WP_038463178.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase -
  AAVB98_RS08555 (AAVB98_08555) - 1620336..1621436 (-) 1101 WP_013350794.1 PIN/TRAM domain-containing protein -
  AAVB98_RS08560 (AAVB98_08560) disA 1621550..1622632 (-) 1083 WP_013350793.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  AAVB98_RS08565 (AAVB98_08565) radA/sms 1622636..1624015 (-) 1380 WP_061573662.1 DNA repair protein RadA Machinery gene
  AAVB98_RS08570 (AAVB98_08570) clpC 1624109..1626544 (-) 2436 WP_013350791.1 ATP-dependent protease ATP-binding subunit ClpC Regulator
  AAVB98_RS08575 (AAVB98_08575) - 1626541..1627632 (-) 1092 WP_013350790.1 protein arginine kinase -

Sequence


Protein


Download         Length: 360 a.a.        Molecular weight: 40590.11 Da        Isoelectric Point: 5.3471

>NTDB_id=894532 AAVB98_RS08560 WP_013350793.1 1621550..1622632(-) (disA) [Bacillus amyloliquefaciens strain Fad 77]
MEKEKKGAKQELDLSAILQFVAPGTPLRAGIENVLRANTGGLIVVGYNDKVKQVVDGGFHINTSFAPAHLYELAKMDGAI
ILSDSGQKILYANTQLMPEATISSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQDSMKYTLKDIGFILTKANQAI
QTLEKYKTILDKTITALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTEGHLICLQVIELITDMEEEAALF
IKDYVKEKIKDPFVLLKELQDMSSYDLLDDSILFKLLGYPASTNLDDYVLPRGYRLLNKIPRLPMPIVENVVEAFGFLPS
ITEATAEELDDVEGIGEVRAQKIKKGLKRLQEKHYIDRQL

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=894532 AAVB98_RS08560 WP_013350793.1 1621550..1622632(-) (disA) [Bacillus amyloliquefaciens strain Fad 77]
ATGGAAAAAGAGAAAAAAGGGGCGAAACAAGAGCTTGACCTGTCTGCAATCCTGCAGTTCGTTGCACCGGGAACCCCGCT
CAGAGCCGGGATAGAAAATGTACTTCGGGCAAATACAGGCGGCCTGATTGTTGTCGGATACAACGATAAGGTAAAACAAG
TCGTGGATGGCGGTTTTCATATTAATACATCATTTGCGCCCGCTCACTTATACGAGCTGGCCAAAATGGACGGAGCCATT
ATTTTAAGTGATTCCGGCCAGAAAATTCTTTATGCGAATACGCAGCTTATGCCGGAGGCGACCATTTCTTCTTCAGAAAC
GGGAATGAGGCACCGTACAGCGGAACGGGTGGCAAAGCAGACCGGCTGTCTCGTCATAGCCATTTCTGAACGCAGAAATG
TCATTACGTTATACCAGGACAGCATGAAGTACACACTAAAGGACATAGGCTTTATTTTAACAAAGGCTAACCAGGCCATT
CAAACGCTTGAGAAGTATAAAACCATTCTAGACAAAACGATTACAGCTTTAAACGCCTTAGAATTTGAGGAGCTTGTGAC
ATTCAGTGACGTGCTGTCCGTCATGCACCGGTATGAAATGGTGCTCCGTATAAAAAATGAAATCAACATGTATATTAAAG
AACTCGGAACGGAAGGCCACTTAATCTGTCTGCAGGTGATTGAACTGATTACGGATATGGAAGAAGAAGCGGCTCTTTTC
ATCAAAGACTATGTAAAAGAAAAAATCAAAGATCCGTTCGTGCTGTTAAAAGAGCTTCAGGATATGTCCAGCTATGATCT
GCTTGATGATTCCATTTTGTTTAAGCTGCTTGGATATCCCGCTTCTACCAATCTCGATGATTATGTTCTGCCGAGAGGAT
ACAGGCTGCTGAACAAAATTCCGCGTCTGCCGATGCCGATTGTTGAAAATGTGGTTGAGGCATTCGGATTTTTGCCAAGC
ATAACGGAAGCGACAGCCGAAGAACTGGATGATGTTGAAGGTATCGGCGAGGTGCGCGCCCAAAAAATCAAAAAAGGCTT
AAAACGCCTCCAAGAAAAACACTATATAGATAGACAGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A9P1NFM6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

94.722

100

0.947