Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   R3L12_RS14515 Genome accession   NZ_CP137057
Coordinates   3104459..3106690 (-) Length   743 a.a.
NCBI ID   WP_149929776.1    Uniprot ID   -
Organism   Acinetobacter soli strain SNUBHAB0075     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3099459..3111690
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R3L12_RS14490 (R3L12_14470) crcB 3099735..3100118 (+) 384 WP_149929779.1 fluoride efflux transporter CrcB -
  R3L12_RS14495 (R3L12_14475) - 3100106..3100465 (-) 360 WP_004932565.1 chaperone modulator CbpM -
  R3L12_RS14500 (R3L12_14480) - 3100477..3101418 (-) 942 WP_149929778.1 DnaJ C-terminal domain-containing protein -
  R3L12_RS14505 (R3L12_14485) - 3101619..3102494 (-) 876 WP_004943908.1 Hsp33 family molecular chaperone HslO -
  R3L12_RS14510 (R3L12_14490) - 3102545..3104386 (-) 1842 WP_149929777.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  R3L12_RS14515 (R3L12_14495) priA 3104459..3106690 (-) 2232 WP_149929776.1 primosomal protein N' Machinery gene
  R3L12_RS14520 (R3L12_14500) gspF 3106829..3108034 (+) 1206 WP_149929775.1 type II secretion system inner membrane protein GspF -
  R3L12_RS14525 (R3L12_14505) gspG 3108059..3108580 (+) 522 WP_149929774.1 type II secretion system major pseudopilin GspG -
  R3L12_RS14530 (R3L12_14510) - 3108843..3109196 (+) 354 WP_215899075.1 hypothetical protein -
  R3L12_RS14535 (R3L12_14515) lnt 3109228..3110790 (-) 1563 WP_004943891.1 apolipoprotein N-acyltransferase -
  R3L12_RS14540 (R3L12_14520) - 3110787..3111626 (-) 840 WP_004932593.1 HlyC/CorC family transporter -

Sequence

Protein


Download         Length: 743 a.a.        Molecular weight: 84143.32 Da        Isoelectric Point: 8.3227

>NTDB_id=894491 R3L12_RS14515 WP_149929776.1 3104459..3106690(-) (priA) [Acinetobacter soli strain SNUBHAB0075]
MHTTPPQPPQDIFRVRVAVPVHLYDTFDYSVSAADYEQAEIGARVLVSFGRQTLVGMITEKLAPDLPLDPRFQLKPIQAL
LDQSPILDQKVLKLLTWSAQYYQFPLGEVIQTALPGLLRQGKDEDILTHIWRIAAHPDPDAKLKRSLKQFEAYQILKLHP
AGTTETILNLSGVDTATLRALQKKELVTCTQEIQDFRPTPVQLAQMPLTANPDQQHAIERVMAHLHAYRAFLLDGLTGSG
KTEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTITRFKSRFHCDVALLHSGLNDSTRLQAWQQAKMGKASIILGTRSAVFT
PLPCLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLENCPIILGSATPSIDSYHLVEQNKLELLELNQRAGVALMPKV
HLIDLKVAKKQHGLSQKLIEQIQHALKRQEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTVHIQPYTYLHCHHCGT
IQRMPEACLACNHPTLKTLGMGTAKVEAHLTELFPEHDVIRVDRDSTSRVGSWQKIYDRIQQNKPMILLGTQMLAKGHHF
PFVTLVAILDIDAGLLSVDVRAPERTAQLIVQVSGRAGRGEHKGEVYLQTLRPDHPMLTTLIEKDYRAVAAEILNERRVA
LLPPYRYSVLVRCESKDREYSQAFLQQAAARFLQQAGSVAEIWGPIPAPMERKAGRYRAHMVILAQDRARLHFFLRSWWA
DTVQQPRQHQLRLSIDVDPQEFS

Nucleotide


Download         Length: 2232 bp        

>NTDB_id=894491 R3L12_RS14515 WP_149929776.1 3104459..3106690(-) (priA) [Acinetobacter soli strain SNUBHAB0075]
ATGCACACTACGCCACCTCAGCCCCCTCAAGACATTTTCCGTGTTCGTGTGGCCGTTCCTGTGCATTTATACGATACCTT
CGACTATAGCGTAAGCGCAGCAGATTATGAACAGGCAGAGATCGGTGCACGCGTTTTAGTCTCGTTTGGCCGTCAGACAC
TGGTCGGTATGATTACTGAAAAACTGGCGCCTGATCTGCCACTCGATCCAAGGTTTCAATTAAAACCGATTCAGGCTTTA
CTGGATCAATCACCGATCTTAGACCAGAAAGTTTTAAAATTATTGACATGGTCGGCGCAATATTACCAATTTCCTCTAGG
CGAAGTGATTCAAACGGCATTACCCGGTTTGCTACGTCAAGGCAAGGACGAGGATATCCTGACGCACATCTGGCGCATCG
CGGCGCATCCCGACCCAGACGCAAAACTCAAGCGCTCGCTCAAACAGTTTGAAGCCTATCAAATTCTCAAGCTACATCCA
GCCGGCACCACTGAGACCATTTTAAATTTAAGCGGCGTCGATACCGCGACCCTTCGGGCTTTACAAAAAAAAGAACTGGT
GACTTGCACACAGGAAATCCAAGATTTCCGTCCCACGCCGGTACAATTGGCACAAATGCCATTAACTGCCAACCCTGACC
AGCAACATGCCATTGAACGCGTTATGGCACATTTGCATGCCTACCGCGCCTTTTTACTCGATGGGCTAACCGGCAGCGGC
AAAACCGAAGTGTATTTGCACATCATGCACGAGGTGCTCAAGCAAGGTAAACAGGTGCTCGTGCTGGTGCCTGAAATTGG
TCTGACACCACAAACCATTACCCGATTCAAATCCCGATTTCACTGTGATGTCGCGTTGCTGCATTCAGGTTTAAACGATT
CCACGCGCTTACAGGCTTGGCAACAGGCCAAAATGGGCAAAGCCTCAATTATTTTGGGCACGCGGTCTGCAGTTTTTACT
CCTTTACCGTGTTTGGGATTGATCATTTTAGATGAAGAGCATGATCTTTCTTTTAAGCAGCAAGAAGGCTTTCGCTATCA
TGCACGCGATGTGGCACTGTATCGTGCGCATCTGGAAAATTGTCCGATTATTCTTGGCTCTGCCACGCCCAGTATCGACA
GTTATCATCTGGTCGAACAAAACAAACTTGAATTACTTGAGTTAAATCAACGTGCCGGCGTGGCATTAATGCCTAAAGTA
CACCTGATCGACTTAAAAGTAGCCAAAAAGCAGCACGGATTGAGCCAAAAGCTGATCGAACAAATCCAGCACGCCCTCAA
GCGCCAAGAACAAGTCCTGATTTTTTTAAACCGACGTGGCTATGCCCCCGTACTGGTCTGCGAAAGTTGCGGCTGGCAAG
CCAATTGTCCACATTGCGACGCACATTTTACCGTACATATCCAACCCTATACCTACCTGCACTGTCACCACTGTGGCACT
ATTCAGCGCATGCCAGAAGCATGTTTGGCCTGCAATCACCCGACCTTAAAAACCTTGGGCATGGGCACTGCAAAAGTCGA
AGCGCATTTGACCGAACTCTTTCCTGAGCATGATGTGATTCGGGTTGATCGTGACAGTACCAGCCGAGTCGGCAGCTGGC
AAAAAATTTATGACCGAATCCAGCAAAACAAGCCGATGATCTTACTCGGAACCCAAATGCTGGCCAAAGGTCATCACTTT
CCGTTTGTGACCTTGGTGGCGATTTTAGATATCGATGCCGGCTTACTGAGTGTCGATGTCCGTGCGCCAGAACGCACCGC
TCAATTGATTGTTCAAGTTTCGGGACGGGCTGGTCGCGGTGAACATAAAGGCGAAGTGTATCTGCAAACCCTGCGCCCCG
ATCATCCAATGCTAACAACGCTGATTGAAAAAGATTATCGTGCCGTTGCCGCCGAAATACTCAATGAACGTCGAGTGGCG
TTGTTGCCCCCTTATCGCTATAGCGTGTTGGTCCGCTGTGAATCCAAAGATCGTGAATACAGTCAGGCTTTTTTACAACA
AGCCGCAGCGCGTTTCTTACAACAGGCAGGCAGTGTGGCCGAGATCTGGGGGCCTATTCCCGCGCCAATGGAACGAAAAG
CAGGACGTTATCGGGCACATATGGTGATTTTGGCGCAAGATCGGGCGCGCTTACATTTCTTTTTACGTTCTTGGTGGGCC
GATACCGTACAGCAACCGCGCCAGCATCAATTACGGCTTTCGATTGATGTCGATCCGCAAGAATTTAGCTGA

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(16-115)

Primosomal protein N C-terminal domain (PriA_C)

(644-739)

Type III restriction enzyme, res subunit (ResIII)

(211-371)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

77.193

99.731

0.77