Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   R0D99_RS04205 Genome accession   NZ_CP136995
Coordinates   870765..871151 (+) Length   128 a.a.
NCBI ID   WP_317750128.1    Uniprot ID   -
Organism   Ottowia sp. SB7-C50     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 865765..876151
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R0D99_RS04180 (R0D99_04180) purH 865985..867616 (+) 1632 WP_317750121.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  R0D99_RS04185 (R0D99_04185) - 867818..868081 (-) 264 WP_317750122.1 hypothetical protein -
  R0D99_RS04190 (R0D99_04190) hemL 868192..869499 (-) 1308 WP_317750123.1 glutamate-1-semialdehyde 2,1-aminomutase -
  R0D99_RS04195 (R0D99_04195) thiD 869483..870421 (-) 939 WP_317750124.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  R0D99_RS04200 (R0D99_04200) - 870519..870689 (+) 171 WP_317750126.1 rubredoxin -
  R0D99_RS04205 (R0D99_04205) pilG 870765..871151 (+) 387 WP_317750128.1 response regulator Regulator
  R0D99_RS04210 (R0D99_04210) - 871151..871516 (+) 366 WP_317750129.1 response regulator -
  R0D99_RS04215 (R0D99_04215) - 871521..872054 (+) 534 WP_317750131.1 chemotaxis protein CheW -
  R0D99_RS04220 (R0D99_04220) - 872080..874329 (+) 2250 WP_317750132.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14115.22 Da        Isoelectric Point: 6.9518

>NTDB_id=894115 R0D99_RS04205 WP_317750128.1 870765..871151(+) (pilG) [Ottowia sp. SB7-C50]
MTSRRVLVIDDSNTIRRSAEIFLKQGGHEVMLAEDGFDALAKVNDTQPDLIFCDILMPRLDGYQTCAIIKRNEKFASTPV
VMLSSKDGVFDKARGRMVGSQDYLTKPFTKSQLLQAVQQFGAAAEGAV

Nucleotide


Download         Length: 387 bp        

>NTDB_id=894115 R0D99_RS04205 WP_317750128.1 870765..871151(+) (pilG) [Ottowia sp. SB7-C50]
ATGACATCAAGGCGAGTGCTCGTCATCGACGACAGCAACACCATTCGGCGCAGCGCCGAGATATTTCTCAAGCAGGGCGG
TCACGAAGTGATGCTGGCCGAGGACGGATTCGATGCGCTGGCCAAGGTCAACGACACGCAGCCCGACCTGATCTTCTGCG
ACATCCTGATGCCGCGGTTGGATGGATATCAGACCTGCGCCATCATCAAGCGCAACGAAAAGTTCGCATCCACGCCGGTG
GTGATGCTGTCGTCCAAGGACGGCGTGTTCGACAAGGCGCGCGGCCGCATGGTGGGCTCGCAGGATTACCTCACCAAGCC
ATTCACCAAGAGCCAGTTGCTGCAGGCGGTGCAGCAGTTTGGCGCCGCTGCCGAAGGAGCCGTGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-118)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

59.13

89.844

0.531