Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   R0Q54_RS15205 Genome accession   NZ_CP136992
Coordinates   2885776..2886570 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis strain J46     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2880776..2891570
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R0Q54_RS15175 (R0Q54_15175) sxzA 2881615..2882646 (+) 1032 WP_003233568.1 FecCD family ABC transporter permease -
  R0Q54_RS15180 (R0Q54_15180) yfhB 2882761..2883642 (+) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  R0Q54_RS15185 (R0Q54_15185) yfhC 2883730..2884314 (+) 585 WP_032723010.1 nitroreductase -
  R0Q54_RS15190 (R0Q54_15190) yfhD 2884353..2884544 (-) 192 WP_003233561.1 YfhD family protein -
  R0Q54_RS15195 (R0Q54_15195) yfhE 2884611..2884721 (-) 111 WP_003223230.1 YfhE family protein -
  R0Q54_RS15200 (R0Q54_15200) yfhF 2884776..2885687 (-) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  R0Q54_RS15205 (R0Q54_15205) recX 2885776..2886570 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  R0Q54_RS15210 (R0Q54_15210) yfhH 2886572..2886886 (+) 315 WP_003244592.1 YfhH family protein -
  R0Q54_RS15215 (R0Q54_15215) yfhI 2887029..2888222 (+) 1194 WP_080478396.1 MFS transporter -
  R0Q54_RS15220 (R0Q54_15220) sspK 2888254..2888406 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  R0Q54_RS15225 (R0Q54_15225) yfhJ 2888531..2888800 (+) 270 WP_003243789.1 YfhJ family protein -
  R0Q54_RS15230 (R0Q54_15230) - 2888911..2890060 (+) 1150 Protein_2948 IS3 family transposase -
  R0Q54_RS15235 (R0Q54_15235) yfhK 2890234..2890752 (+) 519 WP_069964064.1 SH3 domain-containing protein -
  R0Q54_RS15240 (R0Q54_15240) spdL 2890837..2891169 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=894063 R0Q54_RS15205 WP_014479217.1 2885776..2886570(+) (recX) [Bacillus subtilis strain J46]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=894063 R0Q54_RS15205 WP_014479217.1 2885776..2886570(+) (recX) [Bacillus subtilis strain J46]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992