Detailed information
Bioinformatically predicted
Overview
| Name | recB | Type | Machinery gene |
| Locus tag | CYJ98_RS05065 | Genome accession | NZ_CP136962 |
| Coordinates | 1110354..1114010 (+) | Length | 1218 a.a. |
| NCBI ID | WP_101755585.1 | Uniprot ID | A0A9X7I6X0 |
| Organism | Neisseria perflava strain UMB0023 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1105354..1119010
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CYJ98_RS05060 (CYJ98_005060) | - | 1106451..1110209 (+) | 3759 | WP_101755584.1 | hemagglutinin repeat-containing protein | - |
| CYJ98_RS05065 (CYJ98_005065) | recB | 1110354..1114010 (+) | 3657 | WP_101755585.1 | exodeoxyribonuclease V subunit beta | Machinery gene |
| CYJ98_RS05070 (CYJ98_005070) | - | 1114184..1115233 (-) | 1050 | WP_101755586.1 | ATP-dependent DNA helicase | - |
| CYJ98_RS05075 (CYJ98_005075) | - | 1115244..1115954 (-) | 711 | WP_101755587.1 | AAA family ATPase | - |
| CYJ98_RS05080 (CYJ98_005080) | - | 1116099..1116830 (-) | 732 | WP_101755588.1 | phosphoadenylyl-sulfate reductase | - |
| CYJ98_RS05085 (CYJ98_005085) | dinB | 1116946..1118004 (-) | 1059 | WP_101755589.1 | DNA polymerase IV | - |
Sequence
Protein
Download Length: 1218 a.a. Molecular weight: 138249.49 Da Isoelectric Point: 5.7131
>NTDB_id=893783 CYJ98_RS05065 WP_101755585.1 1110354..1114010(+) (recB) [Neisseria perflava strain UMB0023]
MSSALPFDALTLSIDGTNLIEASAGTGKTYGIAALFTRLIVLEKKDIEKILVVTFTKAATAELKTRLRARLDEVLQVLNE
IQTLGGEPEHISDGLNKYYEKEKKSPDNFLNRLIPLALGEQDGQESCHRLILRLKAALSQFDNASIYTIHGFCQRVLRDY
AFLCSAPLDVELSDDSRERLLIPAQDFWRQKVATDTTLAQLVFDRKCTPEEMLAEIKSYTGRPYLKFRRPEGNLKEAQAK
LQETWQKICGQLKDLEKAFWTIFPKLNGQTYKRKTFENVFTDLKTNAESNRLPRLSKQTLEKLSLFSIDTLNSKLKKEYK
ADADAPEIIQLQALANLGRDLQAMKSAEEAVFICLQLDLLSYINQSIAEQKKSRRERVFDDLLLDVHQALTTNEHGNALA
KAAAANWEIALIDEFQDTDPLQYEIFRQIFIEQGCPLFLVGDPKQAIYSFRGADIYAYLQAAQDADRHYTLAVNYRSHAK
LINGISALFKQKKHPFVLENIDYSEVSASRAESRLSPHRPAIQVRWLNTDDQTGKEILRSRAAEYCADEIAFALNEAAEG
RLNFKGRALESGDIAVLVRTNNEAAMIAGKLKQRRIQSVLLSRQSVFDSAEADSLSALIGFWLNPRQTDWLRFVLTGVLF
GYTAKEIYELNHNEHQLLKWLESSAEAMEKWRKGGIFAAVQQFAVLHDIETRLLKGGNERSLTNYYQILELLAEEDSQSR
NPAALHKWLNEQISRARSGHFPSDAQTIRLESDEKLVKIVTMHASKGLQYPLVYCPFAWDTKDNSKENWKILHTENHETE
LLAKSQTSEAELSHLADEKTAEDLRLLYVALTRAEEQLNIYAAANKNCTPNNPFAYLLEGLPDAGRESVSQSYQSTTDVV
EMLKTNWQRFIKNAPENTEFAFTEEAPPETVYQYSRQQDQALSAHSIKRRDFDFIRHTSFTGLSRHTKSTDEQHEPLQPA
IDPAESADRAMPSENLPSPLSDGLDIHHFPRGTNAGVCLHEMLEKLDFAASAESQSEMIAEVLQRHSFEDKWLPTVSAML
DTCRLTPLIGESLSQIPTTRRLPEMGFTLYMDDFKLDDLRRWFASSEANLPPECVQAAQLLDFHDLQGYLNGFIDMVCQD
SDGNVVLIDYKSNHLGNDASAYTQQAMNEAVAHHHYYLQALIYAVAIARYYALRGKPLPKIAIRYLFLRGMDGSDQGIWK
WDIDTALLSTFVERKTNS
MSSALPFDALTLSIDGTNLIEASAGTGKTYGIAALFTRLIVLEKKDIEKILVVTFTKAATAELKTRLRARLDEVLQVLNE
IQTLGGEPEHISDGLNKYYEKEKKSPDNFLNRLIPLALGEQDGQESCHRLILRLKAALSQFDNASIYTIHGFCQRVLRDY
AFLCSAPLDVELSDDSRERLLIPAQDFWRQKVATDTTLAQLVFDRKCTPEEMLAEIKSYTGRPYLKFRRPEGNLKEAQAK
LQETWQKICGQLKDLEKAFWTIFPKLNGQTYKRKTFENVFTDLKTNAESNRLPRLSKQTLEKLSLFSIDTLNSKLKKEYK
ADADAPEIIQLQALANLGRDLQAMKSAEEAVFICLQLDLLSYINQSIAEQKKSRRERVFDDLLLDVHQALTTNEHGNALA
KAAAANWEIALIDEFQDTDPLQYEIFRQIFIEQGCPLFLVGDPKQAIYSFRGADIYAYLQAAQDADRHYTLAVNYRSHAK
LINGISALFKQKKHPFVLENIDYSEVSASRAESRLSPHRPAIQVRWLNTDDQTGKEILRSRAAEYCADEIAFALNEAAEG
RLNFKGRALESGDIAVLVRTNNEAAMIAGKLKQRRIQSVLLSRQSVFDSAEADSLSALIGFWLNPRQTDWLRFVLTGVLF
GYTAKEIYELNHNEHQLLKWLESSAEAMEKWRKGGIFAAVQQFAVLHDIETRLLKGGNERSLTNYYQILELLAEEDSQSR
NPAALHKWLNEQISRARSGHFPSDAQTIRLESDEKLVKIVTMHASKGLQYPLVYCPFAWDTKDNSKENWKILHTENHETE
LLAKSQTSEAELSHLADEKTAEDLRLLYVALTRAEEQLNIYAAANKNCTPNNPFAYLLEGLPDAGRESVSQSYQSTTDVV
EMLKTNWQRFIKNAPENTEFAFTEEAPPETVYQYSRQQDQALSAHSIKRRDFDFIRHTSFTGLSRHTKSTDEQHEPLQPA
IDPAESADRAMPSENLPSPLSDGLDIHHFPRGTNAGVCLHEMLEKLDFAASAESQSEMIAEVLQRHSFEDKWLPTVSAML
DTCRLTPLIGESLSQIPTTRRLPEMGFTLYMDDFKLDDLRRWFASSEANLPPECVQAAQLLDFHDLQGYLNGFIDMVCQD
SDGNVVLIDYKSNHLGNDASAYTQQAMNEAVAHHHYYLQALIYAVAIARYYALRGKPLPKIAIRYLFLRGMDGSDQGIWK
WDIDTALLSTFVERKTNS
Nucleotide
Download Length: 3657 bp
>NTDB_id=893783 CYJ98_RS05065 WP_101755585.1 1110354..1114010(+) (recB) [Neisseria perflava strain UMB0023]
ATGTCTTCCGCCCTTCCTTTTGACGCGCTCACCCTTTCCATCGACGGCACCAACCTCATCGAAGCTTCTGCCGGTACGGG
TAAAACCTACGGCATTGCCGCGCTCTTTACCCGACTTATTGTTTTAGAAAAAAAAGACATCGAGAAAATTCTGGTCGTTA
CCTTTACCAAAGCGGCGACAGCAGAACTGAAAACCCGTTTGCGCGCGCGTTTGGACGAAGTGTTGCAGGTTTTGAACGAA
ATCCAAACCTTGGGTGGCGAGCCGGAACATATTTCAGACGGCCTGAACAAATATTACGAAAAAGAGAAAAAATCCCCCGA
TAACTTTCTCAATCGCTTGATTCCTTTGGCTTTAGGCGAGCAAGACGGACAGGAAAGCTGCCATCGCCTGATTCTCCGCC
TCAAAGCAGCGCTGAGCCAGTTTGACAACGCATCGATTTACACCATCCACGGCTTCTGTCAGCGCGTCTTGCGCGATTAC
GCGTTTTTGTGCAGCGCACCTTTGGATGTCGAGCTGTCGGACGACTCGCGCGAAAGGCTGCTGATTCCAGCGCAGGACTT
TTGGCGGCAGAAAGTGGCAACCGATACCACATTGGCACAATTGGTTTTTGACCGAAAATGCACACCCGAAGAAATGCTTG
CCGAAATCAAAAGCTATACCGGCCGCCCCTATCTGAAATTCAGACGGCCTGAAGGCAATTTGAAAGAAGCTCAAGCCAAG
CTTCAAGAAACATGGCAAAAAATTTGCGGCCAGTTGAAAGACTTGGAAAAAGCGTTTTGGACAATTTTTCCCAAACTGAA
CGGCCAAACCTACAAACGAAAAACCTTTGAAAATGTTTTTACCGATTTAAAAACAAACGCCGAATCCAACCGTCTGCCCC
GCCTGAGCAAACAAACGCTAGAAAAATTAAGCCTCTTCAGTATCGATACGCTCAACAGCAAACTGAAAAAAGAATATAAA
GCCGATGCCGATGCGCCGGAAATTATTCAGCTTCAAGCCTTGGCTAATCTCGGTCGTGATTTGCAGGCAATGAAAAGCGC
GGAAGAAGCAGTCTTCATTTGCCTGCAACTCGACCTACTTTCCTACATCAACCAATCCATTGCCGAACAAAAAAAATCAC
GCCGCGAGCGCGTGTTTGATGATTTGCTGCTGGACGTCCATCAGGCATTGACCACCAATGAACACGGCAACGCATTGGCA
AAAGCGGCAGCGGCAAACTGGGAAATCGCGCTGATTGACGAATTCCAAGATACCGACCCGTTGCAATACGAAATTTTCCG
CCAAATTTTTATCGAACAAGGCTGCCCGCTGTTTCTCGTCGGCGACCCCAAGCAGGCGATTTACAGCTTTCGCGGTGCAG
ACATTTACGCCTATCTGCAAGCCGCTCAAGATGCGGACAGGCATTACACCCTCGCCGTCAACTACCGCAGCCATGCCAAG
CTGATCAACGGCATCAGCGCTTTGTTCAAACAAAAAAAACATCCCTTTGTATTGGAAAACATCGATTACAGCGAGGTCTC
CGCCAGCCGCGCCGAAAGCCGGCTGTCGCCACACCGCCCTGCCATCCAAGTGCGCTGGCTCAATACGGACGATCAAACCG
GCAAAGAGATTTTGCGCAGCCGAGCCGCCGAATATTGCGCCGATGAAATTGCCTTTGCGCTCAATGAAGCAGCCGAAGGC
CGTCTGAATTTCAAAGGCCGCGCGCTGGAATCCGGCGATATTGCCGTTTTGGTCCGTACCAACAACGAAGCGGCGATGAT
TGCCGGAAAACTGAAACAGCGCCGTATCCAAAGCGTGTTGCTGTCGCGCCAGTCCGTTTTCGATTCCGCCGAGGCCGACT
CGCTGTCCGCGCTGATCGGCTTTTGGCTCAACCCAAGGCAAACCGACTGGCTGCGCTTTGTCTTGACCGGCGTTTTGTTC
GGCTATACCGCCAAAGAGATTTACGAACTCAACCACAACGAACACCAGCTGCTCAAATGGCTGGAGTCGTCTGCCGAGGC
CATGGAAAAATGGCGGAAAGGTGGCATTTTTGCCGCCGTGCAGCAGTTTGCCGTCCTACATGATATTGAAACACGCCTGC
TCAAAGGCGGCAACGAGCGCAGCCTGACCAACTACTACCAAATTCTGGAGCTTTTGGCCGAAGAAGACAGCCAAAGCCGC
AACCCTGCCGCCCTGCATAAATGGTTAAACGAACAAATCAGCCGTGCGCGCAGCGGCCATTTCCCGTCAGATGCGCAAAC
CATCCGTCTTGAAAGCGACGAAAAACTGGTCAAAATCGTTACCATGCACGCGTCGAAAGGTTTGCAATATCCTTTGGTTT
ACTGCCCCTTCGCATGGGATACCAAAGACAATTCCAAAGAAAACTGGAAAATCCTACATACCGAAAACCATGAAACCGAG
CTGCTGGCGAAATCGCAAACCTCGGAAGCAGAACTAAGCCATCTGGCCGACGAAAAGACGGCAGAAGATTTACGCCTGCT
TTATGTCGCCCTTACCCGCGCCGAAGAACAGCTCAACATCTACGCTGCCGCCAACAAAAACTGTACGCCGAACAATCCTT
TTGCCTATCTGCTCGAAGGTTTGCCGGATGCCGGCCGCGAAAGCGTCAGCCAAAGCTATCAAAGCACGACAGACGTTGTG
GAAATGCTTAAAACCAACTGGCAACGCTTTATTAAAAACGCGCCTGAAAATACGGAGTTTGCCTTCACGGAAGAAGCTCC
GCCGGAAACCGTCTACCAATACAGCCGCCAGCAAGACCAAGCCTTGAGCGCACATAGCATTAAACGCCGCGATTTTGACT
TTATCCGCCACACCAGCTTTACCGGTTTGAGCAGGCATACTAAGTCAACCGACGAACAACACGAGCCTTTGCAACCTGCC
ATCGATCCGGCAGAAAGCGCAGACCGTGCCATGCCATCTGAAAACCTGCCGTCCCCACTTTCAGACGGCCTCGATATCCA
TCATTTCCCCCGCGGCACCAATGCCGGCGTATGTTTGCATGAAATGTTGGAAAAACTCGACTTCGCCGCCTCTGCCGAGA
GCCAATCCGAAATGATTGCCGAAGTTTTGCAACGCCACAGCTTTGAAGACAAATGGCTGCCGACGGTGAGCGCCATGCTC
GACACCTGCCGCCTGACGCCTTTAATCGGCGAGAGCCTGTCACAGATTCCGACGACCCGACGCCTGCCCGAAATGGGGTT
CACCCTGTACATGGACGATTTCAAACTGGACGACTTGCGCCGTTGGTTTGCCTCAAGCGAAGCAAACCTGCCGCCCGAAT
GCGTTCAAGCCGCGCAACTGCTTGATTTCCATGATTTACAAGGTTATTTGAACGGCTTCATCGATATGGTTTGCCAAGAT
TCAGACGGCAATGTCGTTTTAATCGACTACAAATCCAACCATTTGGGCAACGATGCAAGCGCCTACACGCAACAGGCGAT
GAACGAAGCCGTGGCGCATCATCACTACTACCTGCAAGCCCTGATCTATGCTGTTGCCATTGCGCGCTACTACGCTCTGC
GCGGCAAGCCGTTGCCCAAAATCGCCATCCGCTACCTTTTCCTGCGCGGTATGGACGGCTCGGATCAAGGTATTTGGAAA
TGGGACATCGATACCGCCCTGCTTTCCACTTTTGTTGAACGAAAAACAAATTCTTGA
ATGTCTTCCGCCCTTCCTTTTGACGCGCTCACCCTTTCCATCGACGGCACCAACCTCATCGAAGCTTCTGCCGGTACGGG
TAAAACCTACGGCATTGCCGCGCTCTTTACCCGACTTATTGTTTTAGAAAAAAAAGACATCGAGAAAATTCTGGTCGTTA
CCTTTACCAAAGCGGCGACAGCAGAACTGAAAACCCGTTTGCGCGCGCGTTTGGACGAAGTGTTGCAGGTTTTGAACGAA
ATCCAAACCTTGGGTGGCGAGCCGGAACATATTTCAGACGGCCTGAACAAATATTACGAAAAAGAGAAAAAATCCCCCGA
TAACTTTCTCAATCGCTTGATTCCTTTGGCTTTAGGCGAGCAAGACGGACAGGAAAGCTGCCATCGCCTGATTCTCCGCC
TCAAAGCAGCGCTGAGCCAGTTTGACAACGCATCGATTTACACCATCCACGGCTTCTGTCAGCGCGTCTTGCGCGATTAC
GCGTTTTTGTGCAGCGCACCTTTGGATGTCGAGCTGTCGGACGACTCGCGCGAAAGGCTGCTGATTCCAGCGCAGGACTT
TTGGCGGCAGAAAGTGGCAACCGATACCACATTGGCACAATTGGTTTTTGACCGAAAATGCACACCCGAAGAAATGCTTG
CCGAAATCAAAAGCTATACCGGCCGCCCCTATCTGAAATTCAGACGGCCTGAAGGCAATTTGAAAGAAGCTCAAGCCAAG
CTTCAAGAAACATGGCAAAAAATTTGCGGCCAGTTGAAAGACTTGGAAAAAGCGTTTTGGACAATTTTTCCCAAACTGAA
CGGCCAAACCTACAAACGAAAAACCTTTGAAAATGTTTTTACCGATTTAAAAACAAACGCCGAATCCAACCGTCTGCCCC
GCCTGAGCAAACAAACGCTAGAAAAATTAAGCCTCTTCAGTATCGATACGCTCAACAGCAAACTGAAAAAAGAATATAAA
GCCGATGCCGATGCGCCGGAAATTATTCAGCTTCAAGCCTTGGCTAATCTCGGTCGTGATTTGCAGGCAATGAAAAGCGC
GGAAGAAGCAGTCTTCATTTGCCTGCAACTCGACCTACTTTCCTACATCAACCAATCCATTGCCGAACAAAAAAAATCAC
GCCGCGAGCGCGTGTTTGATGATTTGCTGCTGGACGTCCATCAGGCATTGACCACCAATGAACACGGCAACGCATTGGCA
AAAGCGGCAGCGGCAAACTGGGAAATCGCGCTGATTGACGAATTCCAAGATACCGACCCGTTGCAATACGAAATTTTCCG
CCAAATTTTTATCGAACAAGGCTGCCCGCTGTTTCTCGTCGGCGACCCCAAGCAGGCGATTTACAGCTTTCGCGGTGCAG
ACATTTACGCCTATCTGCAAGCCGCTCAAGATGCGGACAGGCATTACACCCTCGCCGTCAACTACCGCAGCCATGCCAAG
CTGATCAACGGCATCAGCGCTTTGTTCAAACAAAAAAAACATCCCTTTGTATTGGAAAACATCGATTACAGCGAGGTCTC
CGCCAGCCGCGCCGAAAGCCGGCTGTCGCCACACCGCCCTGCCATCCAAGTGCGCTGGCTCAATACGGACGATCAAACCG
GCAAAGAGATTTTGCGCAGCCGAGCCGCCGAATATTGCGCCGATGAAATTGCCTTTGCGCTCAATGAAGCAGCCGAAGGC
CGTCTGAATTTCAAAGGCCGCGCGCTGGAATCCGGCGATATTGCCGTTTTGGTCCGTACCAACAACGAAGCGGCGATGAT
TGCCGGAAAACTGAAACAGCGCCGTATCCAAAGCGTGTTGCTGTCGCGCCAGTCCGTTTTCGATTCCGCCGAGGCCGACT
CGCTGTCCGCGCTGATCGGCTTTTGGCTCAACCCAAGGCAAACCGACTGGCTGCGCTTTGTCTTGACCGGCGTTTTGTTC
GGCTATACCGCCAAAGAGATTTACGAACTCAACCACAACGAACACCAGCTGCTCAAATGGCTGGAGTCGTCTGCCGAGGC
CATGGAAAAATGGCGGAAAGGTGGCATTTTTGCCGCCGTGCAGCAGTTTGCCGTCCTACATGATATTGAAACACGCCTGC
TCAAAGGCGGCAACGAGCGCAGCCTGACCAACTACTACCAAATTCTGGAGCTTTTGGCCGAAGAAGACAGCCAAAGCCGC
AACCCTGCCGCCCTGCATAAATGGTTAAACGAACAAATCAGCCGTGCGCGCAGCGGCCATTTCCCGTCAGATGCGCAAAC
CATCCGTCTTGAAAGCGACGAAAAACTGGTCAAAATCGTTACCATGCACGCGTCGAAAGGTTTGCAATATCCTTTGGTTT
ACTGCCCCTTCGCATGGGATACCAAAGACAATTCCAAAGAAAACTGGAAAATCCTACATACCGAAAACCATGAAACCGAG
CTGCTGGCGAAATCGCAAACCTCGGAAGCAGAACTAAGCCATCTGGCCGACGAAAAGACGGCAGAAGATTTACGCCTGCT
TTATGTCGCCCTTACCCGCGCCGAAGAACAGCTCAACATCTACGCTGCCGCCAACAAAAACTGTACGCCGAACAATCCTT
TTGCCTATCTGCTCGAAGGTTTGCCGGATGCCGGCCGCGAAAGCGTCAGCCAAAGCTATCAAAGCACGACAGACGTTGTG
GAAATGCTTAAAACCAACTGGCAACGCTTTATTAAAAACGCGCCTGAAAATACGGAGTTTGCCTTCACGGAAGAAGCTCC
GCCGGAAACCGTCTACCAATACAGCCGCCAGCAAGACCAAGCCTTGAGCGCACATAGCATTAAACGCCGCGATTTTGACT
TTATCCGCCACACCAGCTTTACCGGTTTGAGCAGGCATACTAAGTCAACCGACGAACAACACGAGCCTTTGCAACCTGCC
ATCGATCCGGCAGAAAGCGCAGACCGTGCCATGCCATCTGAAAACCTGCCGTCCCCACTTTCAGACGGCCTCGATATCCA
TCATTTCCCCCGCGGCACCAATGCCGGCGTATGTTTGCATGAAATGTTGGAAAAACTCGACTTCGCCGCCTCTGCCGAGA
GCCAATCCGAAATGATTGCCGAAGTTTTGCAACGCCACAGCTTTGAAGACAAATGGCTGCCGACGGTGAGCGCCATGCTC
GACACCTGCCGCCTGACGCCTTTAATCGGCGAGAGCCTGTCACAGATTCCGACGACCCGACGCCTGCCCGAAATGGGGTT
CACCCTGTACATGGACGATTTCAAACTGGACGACTTGCGCCGTTGGTTTGCCTCAAGCGAAGCAAACCTGCCGCCCGAAT
GCGTTCAAGCCGCGCAACTGCTTGATTTCCATGATTTACAAGGTTATTTGAACGGCTTCATCGATATGGTTTGCCAAGAT
TCAGACGGCAATGTCGTTTTAATCGACTACAAATCCAACCATTTGGGCAACGATGCAAGCGCCTACACGCAACAGGCGAT
GAACGAAGCCGTGGCGCATCATCACTACTACCTGCAAGCCCTGATCTATGCTGTTGCCATTGCGCGCTACTACGCTCTGC
GCGGCAAGCCGTTGCCCAAAATCGCCATCCGCTACCTTTTCCTGCGCGGTATGGACGGCTCGGATCAAGGTATTTGGAAA
TGGGACATCGATACCGCCCTGCTTTCCACTTTTGTTGAACGAAAAACAAATTCTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recB | Neisseria gonorrhoeae strain FA1090 |
60.729 |
99.097 |
0.602 |