Detailed information NTG0893652

Bioinformatically predicted

Overview

• Name: rpoN/rpoN1
• Type: Machinery gene
• Locus tag: AAH980_RS15305
• Genome accession: NZ_CP154856
• Coordinates: 3249237..3250685 (+)
• Length: 482 a.a.
• NCBI ID: WP_284081192.1
• Uniprot ID: -
• Organism: Acinetobacter nosocomialis strain Ab25
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3244237..3255685

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAH980_RS15305 (AAH980_15305)	rpoN/rpoN1	3249237..3250685 (+)	1449	WP_284081192.1	RNA polymerase factor sigma-54	Machinery gene
AAH980_RS15310 (AAH980_15310)	raiA	3250855..3251193 (+)	339	WP_001167461.1	ribosome-associated translation inhibitor RaiA	-
AAH980_RS15315 (AAH980_15315)	ibaG	3251332..3251583 (+)	252	WP_002050455.1	BolA family iron metabolism protein IbaG	-
AAH980_RS15320 (AAH980_15320)	murA	3251590..3252846 (+)	1257	WP_004710509.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
AAH980_RS15325 (AAH980_15325)	hisG	3252846..3253529 (+)	684	WP_001000724.1	ATP phosphoribosyltransferase	-
AAH980_RS15330 (AAH980_15330)	hisD	3253635..3254924 (+)	1290	WP_284081191.1	histidinol dehydrogenase	-

Sequence

Protein

• Length: 482 a.a.
• Molecular weight: 55028.02 Da
• Isoelectric Point: 4.6513

>NTDB_id=893652 AAH980_RS15305 WP_284081192.1 3249237..3250685(+) (rpoN/rpoN1) [Acinetobacter nosocomialis strain Ab25]
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEDESIAESLSTLEKKEADDLTTELNANHLP
DDLPVDTEWDDIYTHQSTALATPEFEEREDNRQVQMTLKEHMLEQVNLLHFSKIDQLIAYCIVDALDDKGFLDAEMEEII
LAVQHLLNDMDIEEDVEEDEVLVVLKHIQRLDPIGIGARNLAECLKVQLEFLPKETEYLKEAKNLLQYYELLIANDLNKL
LKQTGLSKDQLKFAVDLLKTLKPYPGMDFEKQESEYQIPDVVVAKKDLHWQVQLNPDVMPKLRINSFYSSMIRRADQSDD
NLYLRNQMLEAKNFIKSIDERHKTLLKVATCIVEHQKAFLEIGPEAMKPLVLRDVAEEVELHESTVSRVTTNKYMLTPRG
LFELKYFFSSHVGTTAGGEASSTAIRAMIKKLVSNENPRKPLSDNAIAALLKDEGIEVARRTVAKYRESLHIPSSSERKV
LI

Nucleotide

• Length: 1449 bp

>NTDB_id=893652 AAH980_RS15305 WP_284081192.1 3249237..3250685(+) (rpoN/rpoN1) [Acinetobacter nosocomialis strain Ab25]
ATGAAATTATCTGTTGGATTGAAAGTTGCGAACTCTTTATCGTTAACACCTCAATTGCAGCAGGCAATCCGTTTACTGCA
GCTCTCAAGTTTAGAATTAGAGCAAGAAATTCAAATTCAATTAGATAGTAATCCATTACTTGAAAAAGTGGAAGATGAAT
CAATAGCAGAAAGTTTATCCACTTTAGAAAAAAAAGAGGCAGATGATCTTACTACAGAGTTAAATGCAAACCATTTACCT
GATGATTTACCTGTTGATACTGAGTGGGATGACATTTATACCCATCAGTCTACAGCTCTGGCTACACCTGAATTTGAAGA
GCGTGAGGATAACCGTCAAGTTCAGATGACACTTAAAGAGCATATGTTAGAACAAGTCAATTTATTGCATTTTTCAAAAA
TAGATCAGTTGATTGCTTATTGTATTGTGGATGCCTTAGATGATAAGGGATTTTTAGATGCTGAGATGGAAGAGATAATC
TTAGCTGTACAACATCTATTAAATGATATGGATATTGAGGAAGATGTTGAGGAAGATGAAGTTTTAGTTGTTTTAAAGCA
TATACAACGGCTTGATCCAATTGGCATTGGTGCTCGTAATCTTGCCGAATGTTTAAAAGTTCAGTTAGAGTTTTTACCTA
AAGAAACTGAATATTTAAAAGAAGCTAAAAATCTTCTTCAATATTATGAGTTATTGATTGCGAACGATCTCAATAAATTA
TTAAAACAAACAGGTCTTTCTAAAGATCAGTTAAAGTTTGCAGTTGATTTGCTAAAAACACTAAAGCCTTACCCAGGTAT
GGATTTTGAAAAGCAAGAATCAGAATATCAAATTCCTGATGTAGTAGTTGCTAAGAAGGATTTACATTGGCAAGTTCAGT
TAAATCCTGATGTGATGCCAAAACTAAGAATTAATTCTTTTTATTCGAGTATGATTCGTAGGGCGGATCAGAGTGATGAT
AATTTATATCTGCGTAATCAGATGCTTGAAGCCAAGAATTTTATAAAGAGCATTGATGAGCGCCATAAAACTTTATTAAA
AGTTGCGACTTGTATTGTTGAGCATCAAAAAGCATTTCTTGAAATAGGTCCTGAAGCAATGAAACCGTTGGTACTACGGG
ACGTTGCTGAGGAAGTGGAATTACATGAGTCTACAGTTTCTCGGGTCACAACAAATAAATATATGCTAACACCACGTGGA
CTTTTTGAGTTGAAATACTTCTTTTCTAGTCACGTGGGAACAACAGCAGGCGGGGAGGCTTCCTCTACCGCCATTCGAGC
TATGATTAAAAAGTTGGTATCCAATGAAAATCCACGTAAACCATTGTCTGATAATGCAATTGCTGCTTTGTTAAAAGATG
AAGGGATAGAAGTGGCTAGAAGGACTGTAGCAAAATATCGAGAATCGTTACATATTCCATCGTCATCCGAAAGAAAAGTC
TTGATCTAG

Domains

Predicted by InterProScan.

• Sigma-54 factor, core binding domain (Sigma54_CBD) (110-308)

• Sigma-54 factor, Activator interacting domain (AID) (Sigma54_AID) (7-48)

• Sigma-54, DNA binding domain (Sigma54_DBD) (323-479)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoN/rpoN1	Ralstonia pseudosolanacearum GMI1000	42.885	100	0.456