Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   AAH980_RS04380 Genome accession   NZ_CP154856
Coordinates   929079..930572 (+) Length   497 a.a.
NCBI ID   WP_004708399.1    Uniprot ID   A0AA36NYD0
Organism   Acinetobacter nosocomialis strain Ab25     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 924079..935572
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAH980_RS04355 (AAH980_04355) uppS 924121..924873 (-) 753 WP_004708401.1 polyprenyl diphosphate synthase -
  AAH980_RS04360 (AAH980_04360) frr 924878..925432 (-) 555 WP_002049637.1 ribosome recycling factor -
  AAH980_RS04365 (AAH980_04365) pyrH 925518..926246 (-) 729 WP_000852257.1 UMP kinase -
  AAH980_RS04370 (AAH980_04370) rimO 926298..927641 (-) 1344 WP_000856678.1 30S ribosomal protein S12 methylthiotransferase RimO -
  AAH980_RS04375 (AAH980_04375) glnL 927983..929092 (+) 1110 WP_002049598.1 nitrogen regulation protein NR(II) -
  AAH980_RS04380 (AAH980_04380) luxO 929079..930572 (+) 1494 WP_004708399.1 nitrogen regulation protein NR(I) Regulator
  AAH980_RS04385 (AAH980_04385) adeN 930849..931502 (+) 654 WP_284080061.1 multidrug efflux transcriptional repressor AdeN -
  AAH980_RS04390 (AAH980_04390) argF 931616..932536 (+) 921 WP_002049620.1 ornithine carbamoyltransferase -
  AAH980_RS04395 (AAH980_04395) - 932729..933253 (+) 525 WP_004708393.1 protein tyrosine phosphatase family protein -
  AAH980_RS04400 (AAH980_04400) ispF 933250..933732 (-) 483 WP_002049661.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  AAH980_RS04405 (AAH980_04405) - 933836..934480 (+) 645 WP_004708391.1 hypothetical protein -

Sequence

Protein


Download         Length: 497 a.a.        Molecular weight: 56250.08 Da        Isoelectric Point: 6.3154

>NTDB_id=893597 AAH980_RS04380 WP_004708399.1 929079..930572(+) (luxO) [Acinetobacter nosocomialis strain Ab25]
MSRNKIWVIDDDRAMRWVLEKTFKEEGFDVTNFEEAQTALERLHHDAPDVILTDIRMPGIDGLTFLSKVKNSHPDLPVII
MTAHSDLESAVSSYQTGAFEYLPKPFDIDEALALVNRAILHINKLQQQEATKTASPLQSTEIIGESPAMQEVFRAIGRLS
QSHITVLINGESGTGKELVAHALHKHSPRRAKPFIALNMAAIPKDLIETELFGHEKGAFTGANTQHQGRFEQANGGTLFL
DEIGDMPFETQTRLLRVLADGEFYRVGGHIPVKVDVRIVAATHQDLEKLVNEGRFREDLYHRLNVIRIHIPKLAHRSEDI
PMLAQHFLARAGKELGVSPKILRTETTDYMQQLPWPGNVRQLENTCRWLTVMITGREVYPEDLPSELKQVPLQKNSEASQ
PAPSFERISLHHWDELLSQWAIQKLKNGEMKILDIATPMFERTLINAALQQTRGRKRHAAELLGWGRNTLTRKLKELGMD
SADDDDEDEHKVTLSEA

Nucleotide


Download         Length: 1494 bp        

>NTDB_id=893597 AAH980_RS04380 WP_004708399.1 929079..930572(+) (luxO) [Acinetobacter nosocomialis strain Ab25]
GTGTCGCGAAATAAAATATGGGTTATTGATGACGATCGCGCCATGCGATGGGTACTTGAAAAGACCTTTAAAGAAGAAGG
ATTTGACGTCACCAATTTTGAAGAAGCTCAAACAGCACTCGAACGTTTACATCATGATGCGCCGGATGTGATCTTAACTG
ACATCCGTATGCCAGGCATTGATGGGTTAACTTTCTTATCTAAAGTAAAAAATTCTCATCCCGATTTGCCTGTGATCATT
ATGACAGCGCATTCGGACTTAGAGTCTGCTGTATCTAGCTATCAAACTGGTGCATTTGAGTATTTACCAAAACCGTTTGA
TATTGATGAAGCTTTAGCTTTAGTCAATCGAGCAATTTTACATATCAATAAATTGCAGCAGCAAGAGGCTACAAAAACTG
CTTCTCCGCTACAATCGACAGAAATTATTGGTGAATCTCCGGCTATGCAAGAGGTTTTCCGAGCAATTGGTCGCTTATCT
CAGTCGCATATTACCGTTTTAATTAATGGTGAGTCAGGAACAGGTAAAGAATTAGTTGCACATGCTTTACATAAGCATTC
ACCACGCAGAGCCAAACCATTTATTGCTCTAAACATGGCAGCAATTCCGAAAGACTTAATTGAAACGGAATTATTTGGCC
ATGAAAAAGGTGCTTTTACTGGCGCTAATACTCAACATCAAGGTCGCTTTGAACAAGCCAATGGCGGCACTCTCTTCCTT
GATGAAATTGGTGACATGCCATTTGAAACACAGACGCGATTACTACGTGTACTCGCAGATGGTGAGTTTTACCGCGTTGG
CGGGCATATCCCTGTTAAAGTTGATGTTCGGATCGTAGCGGCAACACACCAAGATTTAGAAAAATTGGTAAATGAAGGTC
GCTTCCGTGAAGACTTATACCACCGTCTAAATGTAATTCGTATTCATATTCCTAAGCTTGCACATCGAAGTGAAGATATT
CCGATGTTAGCTCAACATTTCTTGGCTCGTGCTGGTAAAGAGTTAGGCGTAAGTCCAAAGATTTTACGTACCGAGACAAC
TGACTATATGCAGCAATTACCATGGCCCGGTAATGTTCGTCAGCTTGAAAATACCTGCCGCTGGTTAACCGTCATGATTA
CTGGCCGTGAGGTTTACCCAGAAGATTTACCTTCAGAACTTAAACAAGTTCCACTCCAAAAAAATAGTGAAGCTAGCCAA
CCTGCTCCATCTTTTGAGCGTATTTCTTTACATCATTGGGATGAGCTACTAAGTCAATGGGCAATTCAAAAACTCAAAAA
TGGCGAAATGAAGATTTTGGATATTGCTACACCAATGTTTGAGCGTACTTTAATTAATGCTGCACTACAGCAAACTCGTG
GGCGCAAACGTCATGCAGCCGAGCTATTAGGTTGGGGTCGTAACACTCTAACCCGAAAGTTAAAAGAACTAGGTATGGAT
TCTGCTGATGACGATGATGAGGATGAACACAAAGTAACTTTGTCTGAAGCTTAA

Domains

Predicted by InterProScan.

Bacterial regulatory protein, Fis family (HTH_8)

(439-477)

Response regulator receiver domain (Response_reg)

(6-115)

Sigma-54 interaction domain (Sigma54_activat)

(142-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36NYD0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

40.402

90.141

0.364
  pilR Pseudomonas aeruginosa PAK

37.5

96.579

0.362