Detailed information NTG0893547

Bioinformatically predicted

Overview

• Name: rcrQ
• Type: Regulator
• Locus tag: RJD36_RS05075
• Genome accession: NZ_CP136943
• Coordinates: 969496..971268 (+)
• Length: 590 a.a.
• NCBI ID: WP_058692202.1
• Uniprot ID: -
• Organism: Streptococcus pasteurianus strain WUSP082
• Function: regulate competence (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	951714..972954	969496..971268	within	0

Gene organization within MGE regions

Location: 951714..972954

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJD36_RS04990 (RJD36_04990)	-	952499..952879 (+)	381	WP_003065285.1	DUF1149 family protein	-
RJD36_RS04995 (RJD36_04995)	-	952879..953727 (+)	849	WP_003065283.1	DegV family protein	-
RJD36_RS05000 (RJD36_05000)	dapB	953747..954514 (+)	768	WP_003065282.1	4-hydroxy-tetrahydrodipicolinate reductase	-
RJD36_RS05005 (RJD36_05005)	-	954511..955716 (+)	1206	WP_003065280.1	CCA tRNA nucleotidyltransferase	-
RJD36_RS05010 (RJD36_05010)	-	955713..957584 (+)	1872	WP_317751488.1	ABC-F family ATP-binding cassette domain-containing protein	-
RJD36_RS05015 (RJD36_05015)	-	957663..959402 (+)	1740	WP_003065277.1	ABC transporter ATP-binding protein	-
RJD36_RS05020 (RJD36_05020)	-	959405..961174 (+)	1770	WP_013851968.1	ABC transporter ATP-binding protein	-
RJD36_RS05025 (RJD36_05025)	queC	961425..962078 (+)	654	WP_013851967.1	7-cyano-7-deazaguanine synthase QueC	-
RJD36_RS05030 (RJD36_05030)	queD	962078..962524 (+)	447	WP_003065271.1	6-carboxytetrahydropterin synthase QueD	-
RJD36_RS05035 (RJD36_05035)	queE	962517..963230 (+)	714	WP_003065269.1	7-carboxy-7-deazaguanine synthase QueE	-
RJD36_RS05040 (RJD36_05040)	queF	963243..963734 (+)	492	WP_003065267.1	preQ(1) synthase	-
RJD36_RS05045 (RJD36_05045)	-	963790..964287 (-)	498	WP_003065265.1	DUF308 domain-containing protein	-
RJD36_RS05050 (RJD36_05050)	gdhA	964533..965882 (+)	1350	WP_003065263.1	NADP-specific glutamate dehydrogenase	-
RJD36_RS05055 (RJD36_05055)	-	966159..966668 (+)	510	WP_117479609.1	GNAT family N-acetyltransferase	-
RJD36_RS05060 (RJD36_05060)	-	966665..967075 (+)	411	WP_003065257.1	peptide deformylase	-
RJD36_RS05065 (RJD36_05065)	rcrR	967248..967688 (+)	441	WP_061100410.1	MarR family winged helix-turn-helix transcriptional regulator	Regulator
RJD36_RS05070 (RJD36_05070)	rcrP	967692..969506 (+)	1815	WP_117479607.1	ABC transporter ATP-binding protein	Regulator
RJD36_RS05075 (RJD36_05075)	rcrQ	969496..971268 (+)	1773	WP_058692202.1	ABC transporter ATP-binding protein	Regulator
RJD36_RS05080 (RJD36_05080)	-	971535..972512 (+)	978	WP_117479603.1	alcohol dehydrogenase catalytic domain-containing protein	-
RJD36_RS05085 (RJD36_05085)	-	972502..972954 (+)	453	WP_003065246.1	MarR family winged helix-turn-helix transcriptional regulator	-

Sequence

Protein

• Length: 590 a.a.
• Molecular weight: 65338.42 Da
• Isoelectric Point: 5.1262

>NTDB_id=893547 RJD36_RS05075 WP_058692202.1 969496..971268(+) (rcrQ) [Streptococcus pasteurianus strain WUSP082]
MENKKKTSFYDRMKPYIRGFQLPFLLAVIGAIVSATVTVIGPDKLKEITNTITKGLTPTATGMIPGIDLDKVGKIALTLA
ILYVISAVVGYIQSFTVATIVQRFSQRLRKAIQTKIDKVPLNYFDSHSQGDTLSRVTNDVDLLGQSLNQSLGTLVTSTML
LIGSIFMMFHSNVSMALTAIGSVLIGFVLVMVIMGSSQPLFKRQQNNLAAINGYVEEIYSGHNVVTSYNAAGETSETFKK
LNTNLYKSMWQSQFLSGIMMPLMIFVGNFGYVMVCVVGAVKVINGDITMGDVVAFMTYVRIFSQPLSQIAQAFTQMQSAT
AAMSRVFEFLEEDEMEDESDKERQLSDVNGEVTFDNVFFGYSKDKTIIHDFSAVAKPGQKVAIVGPTGAGKTTIVNLLMK
FYEIDKGQITIDGVDTRLMTREEVHDQFSMVLQDTWLFEGTIKENLIYNQENITDEQVIAAAKAVGVHHFIMTLPKGYDT
YLDDSVTLSIGQKQLLTIARALLKDSPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDDLMQQGGFYADLYNSQFEVA

Nucleotide

• Length: 1773 bp

>NTDB_id=893547 RJD36_RS05075 WP_058692202.1 969496..971268(+) (rcrQ) [Streptococcus pasteurianus strain WUSP082]
ATGGAAAATAAGAAAAAAACATCTTTCTATGACAGAATGAAGCCCTATATTAGAGGTTTCCAGCTTCCATTTCTTCTTGC
AGTGATTGGAGCAATTGTTTCTGCGACGGTTACGGTTATTGGACCTGATAAATTAAAAGAAATCACCAATACAATCACCA
AAGGTTTGACACCAACGGCGACTGGTATGATTCCAGGAATCGACTTGGATAAAGTTGGTAAAATTGCATTAACTTTGGCA
ATTTTATACGTTATTTCAGCAGTAGTTGGTTATATTCAAAGCTTTACCGTAGCGACTATCGTTCAACGTTTTTCACAACG
TTTACGTAAAGCTATTCAGACCAAAATTGACAAGGTTCCATTGAATTACTTTGATAGTCATTCGCAAGGGGACACCCTTT
CTCGTGTGACAAATGACGTTGACTTGCTTGGTCAATCGCTTAACCAAAGTTTGGGAACTTTGGTGACATCAACCATGTTA
TTGATTGGATCAATTTTCATGATGTTCCATTCAAATGTCAGCATGGCTCTAACAGCGATTGGGTCTGTTCTGATTGGTTT
TGTTTTGGTTATGGTTATCATGGGCTCATCACAACCATTGTTCAAACGTCAACAAAATAACTTGGCTGCGATTAATGGTT
ATGTTGAAGAAATTTACTCTGGTCATAATGTGGTAACAAGTTATAACGCTGCTGGTGAAACAAGCGAAACCTTTAAAAAA
TTAAACACCAATCTTTATAAATCAATGTGGCAATCACAGTTCTTGTCAGGTATTATGATGCCGCTTATGATTTTCGTTGG
GAACTTTGGTTATGTTATGGTCTGTGTGGTTGGTGCCGTTAAAGTTATCAATGGTGATATTACCATGGGGGATGTGGTTG
CCTTTATGACTTATGTTCGTATCTTCTCACAACCATTGTCACAAATTGCGCAAGCTTTCACACAAATGCAATCAGCAACA
GCTGCCATGAGCCGTGTCTTTGAATTCCTTGAAGAAGATGAAATGGAAGATGAGTCTGATAAGGAACGTCAACTTAGTGA
TGTTAATGGTGAAGTTACCTTTGATAATGTTTTCTTTGGTTATTCTAAGGATAAAACAATTATCCATGATTTCTCCGCTG
TGGCGAAACCTGGTCAGAAAGTTGCCATTGTTGGACCAACAGGCGCTGGTAAAACAACCATTGTTAACCTGCTCATGAAA
TTCTATGAAATCGATAAAGGTCAAATCACTATTGATGGTGTGGATACACGTTTGATGACACGTGAAGAAGTGCATGACCA
ATTCTCAATGGTGCTTCAAGATACGTGGTTGTTTGAAGGAACAATCAAAGAAAACTTGATTTACAATCAAGAAAATATTA
CAGACGAACAAGTTATTGCAGCGGCTAAGGCTGTTGGTGTTCATCACTTTATCATGACACTTCCAAAGGGTTATGACACT
TATCTTGATGATTCTGTAACACTTTCAATTGGTCAAAAACAACTCTTGACGATTGCGCGTGCTCTTTTGAAAGATTCACC
GCTCCTTATTTTGGACGAAGCAACGTCATCAGTTGATACACGTACTGAAGAATTGATTCAAAAAGCTATGGATAAATTGA
TGGAAGGTCGTACATCATTTGTTATCGCTCACCGTTTGTCAACGATTAGAAACGCTGACCTTATCCTTGTGATGAAAGAT
GGTAACATCATCGAACAAGGCAATCACGATGATTTGATGCAACAAGGCGGATTCTATGCTGACCTCTACAACTCACAATT
TGAAGTAGCTTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (370-516)

• ABC transporter transmembrane region (ABC_membrane) (25-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rcrQ	Streptococcus mutans UA159	73.311	100	0.736