Detailed information NTG0893541

Bioinformatically predicted

Overview

• Name: comEC/celB
• Type: Machinery gene
• Locus tag: RJD36_RS03075
• Genome accession: NZ_CP136943
• Coordinates: 564652..566883 (+)
• Length: 743 a.a.
• NCBI ID: WP_117479310.1
• Uniprot ID: -
• Organism: Streptococcus pasteurianus strain WUSP082
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 559652..571883

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJD36_RS03045 (RJD36_03045)	-	560303..561163 (+)	861	WP_048791495.1	helix-turn-helix transcriptional regulator	-
RJD36_RS03050 (RJD36_03050)	-	561222..561796 (+)	575	Protein_532	ROK family protein	-
RJD36_RS03055 (RJD36_03055)	-	562028..562309 (-)	282	WP_003063819.1	GIY-YIG nuclease family protein	-
RJD36_RS03060 (RJD36_03060)	-	562284..563045 (-)	762	WP_003063822.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	-
RJD36_RS03065 (RJD36_03065)	-	563153..563899 (+)	747	WP_003063827.1	1-acyl-sn-glycerol-3-phosphate acyltransferase	-
RJD36_RS03070 (RJD36_03070)	comEA	563994..564659 (+)	666	WP_013851600.1	helix-hairpin-helix domain-containing protein	Machinery gene
RJD36_RS03075 (RJD36_03075)	comEC/celB	564652..566883 (+)	2232	WP_117479310.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
RJD36_RS03080 (RJD36_03080)	holA	566957..567994 (+)	1038	WP_003063837.1	DNA polymerase III subunit delta	-
RJD36_RS03085 (RJD36_03085)	sodA	568083..568691 (+)	609	WP_013851603.1	superoxide dismutase SodA	-
RJD36_RS03090 (RJD36_03090)	-	568840..569565 (+)	726	WP_013851604.1	YebC/PmpR family DNA-binding transcriptional regulator	-
RJD36_RS03095 (RJD36_03095)	queA	569597..570625 (-)	1029	WP_003063841.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
RJD36_RS03100 (RJD36_03100)	-	570801..571301 (+)	501	WP_003063844.1	VIT1/CCC1 transporter family protein	-

Sequence

Protein

• Length: 743 a.a.
• Molecular weight: 83826.10 Da
• Isoelectric Point: 8.0790

>NTDB_id=893541 RJD36_RS03075 WP_117479310.1 564652..566883(+) (comEC/celB) [Streptococcus pasteurianus strain WUSP082]
MIKYFPIKPIQLAFLLILLYYFCFSKVIGCLMFLLLALVFLWQQYGWKAWCQVCLCLTCFAVFFLTKANQTEQAYQAAPD
HLTKTQMIPDTISVNGDLLSFRGKEAGRTYQIFYTLKSEKEQHFFKTLSQTVVLSGDMDLEEATPQRNFDGFDYRTYLKH
EGIYRVVNLSAINNVELVHKTTLWDKLHDVRRKAIVSIQQHFPAPMQHYMTGLLFGYLDKSFDEMSDVYTSLGIIHLFAL
SGMQVGFFVGAFRFFFLHLGLRRDYVDILQIPFSLVYAGLAGFSVSVIRSLIQSAFANLGIKKLDNLALTLFVLFIVMPN
FLLTMGGILSFTYAFILSFINFDDISRYQKIIAESLTISLASLPLLIHFFAVFQPLSVLLTAIFSVAFDTIMLPMLSIIF
ILSPLVKLTCFNGCFVFLETVIKHTKAILGGPIVFGKPNLGILVLLFLMLGVLYDCWRRKKTAIFLVSLVALLFFQIKHP
LENEVTVVDIGQGDSIFVRDVKGHTLLIDVGGKVSFSEKNAWQERLTDSNAERTLIPYLNSRGVGKIDQLVLTHTDTDHM
GDMLEVAKQVKIGEILVSQGSLTKPDFVAKLQAMKTKVRVVTAGDVLPIMGSHLQVLYPSQTGDGGNNDSVVLYGNLLGK
NFLFTGDLEEEGEQELIATYPNLPVDVLKAGHHGSKGSSSSEFLAHISPQIALISAGQNNRYKHPHQETLERFRVQNMTI
YRTDEQGAIRFRGLNHWKIETVR

Nucleotide

• Length: 2232 bp

>NTDB_id=893541 RJD36_RS03075 WP_117479310.1 564652..566883(+) (comEC/celB) [Streptococcus pasteurianus strain WUSP082]
TTGATTAAATATTTTCCCATTAAGCCAATTCAATTGGCTTTTTTGCTCATTTTGCTCTATTATTTTTGCTTTTCAAAAGT
GATTGGGTGTTTGATGTTTCTCTTGTTAGCCTTGGTGTTTTTATGGCAACAGTATGGTTGGAAGGCTTGGTGTCAAGTTT
GCTTGTGTTTAACCTGTTTTGCGGTATTTTTTCTGACTAAGGCTAATCAGACAGAGCAGGCTTATCAAGCAGCACCAGAT
CATTTAACAAAAACCCAGATGATTCCTGACACGATTTCGGTCAATGGGGATTTGCTGTCCTTTCGAGGTAAGGAAGCTGG
GCGGACTTATCAGATTTTTTATACCTTGAAATCGGAGAAAGAACAGCATTTTTTTAAGACATTAAGTCAAACGGTTGTTT
TATCTGGTGATATGGATTTGGAAGAAGCAACGCCCCAGCGGAATTTTGATGGTTTTGATTATCGTACTTACCTTAAACAT
GAAGGTATTTATCGTGTGGTAAATTTGTCGGCGATTAACAATGTTGAACTTGTTCATAAGACGACTTTGTGGGATAAGCT
ACATGATGTTCGACGAAAGGCTATTGTTAGTATTCAGCAGCATTTTCCTGCTCCTATGCAACATTATATGACTGGGCTTT
TGTTTGGCTATCTGGATAAATCGTTTGATGAGATGAGTGATGTTTACACGAGTTTAGGAATTATTCACCTCTTTGCTCTT
TCAGGCATGCAGGTTGGCTTTTTTGTGGGGGCATTCCGCTTTTTCTTTCTACATCTTGGGTTACGCCGAGATTATGTGGA
CATACTACAAATCCCATTTTCACTCGTCTATGCGGGGCTGGCTGGCTTTTCTGTTTCGGTAATTCGGAGTTTAATTCAAT
CTGCTTTTGCAAATCTTGGTATTAAAAAATTAGATAACTTGGCTTTAACTTTGTTTGTTCTTTTTATAGTTATGCCAAAT
TTTCTGCTGACGATGGGAGGCATTCTTTCGTTTACTTACGCTTTTATTCTCAGTTTTATTAACTTTGATGACATTAGTCG
CTATCAGAAAATCATTGCGGAAAGTTTGACGATTTCATTAGCCAGTTTGCCCTTGTTAATTCATTTTTTTGCTGTGTTTC
AACCGTTATCTGTCTTATTGACCGCAATTTTTTCTGTGGCATTTGACACTATTATGTTGCCAATGCTATCAATCATTTTT
ATTTTATCGCCCTTGGTTAAACTGACTTGTTTTAATGGTTGTTTTGTTTTCTTGGAAACTGTTATCAAGCACACTAAGGC
AATTTTGGGCGGTCCGATTGTTTTTGGTAAACCAAATCTTGGTATCTTAGTGCTACTATTTTTAATGTTAGGCGTGCTTT
ATGATTGCTGGCGACGAAAGAAAACGGCAATTTTTCTTGTCAGCTTAGTAGCTCTGCTATTTTTTCAAATCAAGCATCCG
CTAGAAAACGAGGTGACGGTGGTTGATATTGGGCAGGGAGATAGTATTTTTGTGCGTGATGTTAAGGGGCATACGCTGCT
AATTGATGTGGGCGGAAAGGTGAGTTTTAGTGAGAAGAACGCGTGGCAGGAGCGGCTGACGGATAGCAATGCGGAGCGAA
CGTTGATTCCTTATCTCAACAGTCGCGGCGTTGGAAAAATTGACCAGTTAGTTCTGACGCACACGGATACTGACCACATG
GGAGATATGCTAGAGGTGGCAAAGCAGGTGAAAATTGGTGAAATTCTGGTTAGTCAGGGAAGTTTGACAAAGCCAGATTT
TGTGGCGAAATTACAAGCCATGAAAACCAAGGTGCGCGTGGTAACAGCTGGTGATGTTTTGCCGATTATGGGAAGTCACC
TGCAAGTGCTTTATCCGAGCCAGACTGGTGATGGTGGTAACAATGACTCGGTGGTGCTTTATGGGAATCTTTTGGGTAAG
AATTTCTTGTTTACAGGAGATTTGGAAGAAGAAGGCGAGCAAGAGTTGATAGCAACTTATCCCAATCTGCCGGTTGATGT
CTTAAAAGCAGGGCATCATGGCTCAAAAGGATCATCAAGTTCAGAATTTCTCGCTCACATTTCACCGCAAATTGCTTTGA
TTTCCGCAGGGCAAAATAACCGTTACAAACATCCTCACCAAGAAACGCTTGAACGCTTCCGAGTACAAAACATGACCATT
TACCGCACAGACGAGCAAGGCGCTATCCGCTTTAGAGGACTAAATCACTGGAAAATCGAAACAGTGAGGTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (213-459)

• Domain of unknown function (DUF4131) (DUF4131) (27-174)

• Metallo-beta-lactamase superfamily (Lactamase_B) (491-697)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/celB	Streptococcus mitis NCTC 12261	52.561	99.865	0.525
comEC/celB	Streptococcus mitis SK321	52.022	99.865	0.52
comEC/celB	Streptococcus pneumoniae TIGR4	51.009	100	0.51
comEC/celB	Streptococcus pneumoniae Rx1	50.471	100	0.505
comEC/celB	Streptococcus pneumoniae D39	50.471	100	0.505
comEC/celB	Streptococcus pneumoniae R6	50.471	100	0.505
comEC	Lactococcus lactis subsp. cremoris KW2	47.241	100	0.472