Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   AAIS09_RS02650 Genome accession   NZ_CP154595
Coordinates   513533..513799 (+) Length   88 a.a.
NCBI ID   WP_001811621.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain serotype 4     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 508533..518799
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAIS09_RS02630 (AAIS09_02625) - 508639..509148 (+) 510 WP_000619941.1 GNAT family N-acetyltransferase -
  AAIS09_RS02635 (AAIS09_02630) pheT 509225..511630 (+) 2406 WP_369917439.1 phenylalanine--tRNA ligase subunit beta -
  AAIS09_RS02640 (AAIS09_02635) - 511803..512804 (-) 1002 WP_061813550.1 endonuclease/exonuclease/phosphatase family protein -
  AAIS09_RS02645 (AAIS09_02640) - 512960..513448 (+) 489 Protein_520 transposase -
  AAIS09_RS02650 (AAIS09_02645) HI0659 513533..513799 (+) 267 WP_001811621.1 helix-turn-helix domain-containing protein Machinery gene
  AAIS09_RS02655 (AAIS09_02650) metE 514059..516308 (+) 2250 WP_061813549.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  AAIS09_RS02660 (AAIS09_02655) metF 516372..517238 (+) 867 WP_000089968.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9560.13 Da        Isoelectric Point: 4.8274

>NTDB_id=893444 AAIS09_RS02650 WP_001811621.1 513533..513799(+) (HI0659) [Streptococcus pneumoniae strain serotype 4]
MEGCLSELFSKEEILESDMRVAIMSELIEARNKQGISQKKLEEVSGVSQPVIARMETGKTSPQLDTVLKVLASLGKTLAV
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=893444 AAIS09_RS02650 WP_001811621.1 513533..513799(+) (HI0659) [Streptococcus pneumoniae strain serotype 4]
TTGGAAGGATGTCTATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTAGCTATCATGAGCGAGTT
GATTGAAGCCAGAAATAAGCAAGGAATCAGTCAGAAAAAGCTAGAGGAAGTCAGTGGAGTGAGTCAGCCTGTTATAGCTA
GGATGGAGACAGGTAAGACTAGTCCACAGTTGGACACAGTCTTAAAAGTCCTAGCTAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(28-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

61.039

87.5

0.534