Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   P4826_RS09035 Genome accession   NZ_CP136921
Coordinates   1872161..1872559 (-) Length   132 a.a.
NCBI ID   WP_317703508.1    Uniprot ID   -
Organism   Diaphorobacter limosus strain Y-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1867161..1877559
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P4826_RS09020 (P4826_09020) - 1869002..1871245 (-) 2244 WP_317703505.1 methyl-accepting chemotaxis protein -
  P4826_RS09025 (P4826_09025) - 1871264..1871791 (-) 528 WP_317703506.1 chemotaxis protein CheW -
  P4826_RS09030 (P4826_09030) - 1871796..1872161 (-) 366 WP_317703507.1 response regulator -
  P4826_RS09035 (P4826_09035) pilG 1872161..1872559 (-) 399 WP_317703508.1 response regulator Regulator
  P4826_RS09040 (P4826_09040) - 1872627..1872779 (-) 153 WP_317703746.1 rubredoxin -
  P4826_RS09045 (P4826_09045) - 1872895..1873827 (+) 933 WP_317703509.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  P4826_RS09050 (P4826_09050) hemL 1873811..1875115 (+) 1305 WP_317703510.1 glutamate-1-semialdehyde 2,1-aminomutase -
  P4826_RS09055 (P4826_09055) purH 1875355..1876962 (-) 1608 WP_317703747.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  P4826_RS09060 (P4826_09060) - 1877035..1877268 (-) 234 WP_317703511.1 Fis family transcriptional regulator -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14771.97 Da        Isoelectric Point: 5.8390

>NTDB_id=893433 P4826_RS09035 WP_317703508.1 1872161..1872559(-) (pilG) [Diaphorobacter limosus strain Y-1]
MTTSDTTFRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFS
DTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLLAVQQFANAQQGVM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=893433 P4826_RS09035 WP_317703508.1 1872161..1872559(-) (pilG) [Diaphorobacter limosus strain Y-1]
ATGACGACAAGCGATACCACTTTCAGAGTACTCGTGGTGGACGACAGCAACACCATTCGGCGCAGTGCCGAGATTTTTTT
GAAGCAGGGCGGTCACGAGGTGTTGCTGGCCGACGATGGCTTCGACGCCTTGTCCAAGGTCAATGATTACCAGCCCCAGC
TGATCTTCTGCGACATCCTGATGCCCAAGCTCGATGGCTACCAGACCTGCGCCATCATCAAGCGCAACGCGCGCTTTTCC
GATACGCCGGTGGTCATGCTGTCCTCCAAGGACGGGGTGTTCGACAAGGCGCGCGGGCGCATGGTCGGCTGCCAGGAATA
CCTCACCAAACCCTTCACCAAAGACCAGCTGCTGCTGGCCGTGCAGCAATTTGCCAATGCGCAACAAGGAGTGATGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

55.372

91.667

0.508