Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   UXR08_RS09970 Genome accession   NZ_CP154497
Coordinates   2017361..2018179 (-) Length   272 a.a.
NCBI ID   WP_001124422.1    Uniprot ID   P66002
Organism   Staphylococcus aureus strain BSN57     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2012361..2023179
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UXR08_RS09950 (UXR08_09950) - 2013454..2014431 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  UXR08_RS09955 (UXR08_09955) - 2014692..2015528 (-) 837 WP_000886462.1 membrane protein -
  UXR08_RS09960 (UXR08_09960) - 2015537..2017054 (-) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  UXR08_RS09965 (UXR08_09965) - 2017069..2017383 (-) 315 WP_000435806.1 YfhH family protein -
  UXR08_RS09970 (UXR08_09970) recX 2017361..2018179 (-) 819 WP_001124422.1 recombination regulator RecX Regulator
  UXR08_RS09975 (UXR08_09975) sgtB 2018439..2019248 (-) 810 WP_000830384.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  UXR08_RS09980 (UXR08_09980) - 2019588..2020103 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  UXR08_RS09985 (UXR08_09985) - 2020234..2020395 (-) 162 WP_001005407.1 SE1561 family protein -
  UXR08_RS09990 (UXR08_09990) - 2020722..2020823 (+) 102 WP_011447034.1 hypothetical protein -
  UXR08_RS09995 (UXR08_09995) - 2021149..2021334 (-) 186 WP_001286805.1 hypothetical protein -
  UXR08_RS10000 (UXR08_10000) - 2021336..2021446 (-) 111 WP_000139423.1 hypothetical protein -
  UXR08_RS10005 (UXR08_10005) - 2021517..2021669 (-) 153 WP_001788502.1 hypothetical protein -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=893401 UXR08_RS09970 WP_001124422.1 2017361..2018179(-) (recX) [Staphylococcus aureus strain BSN57]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=893401 UXR08_RS09970 WP_001124422.1 2017361..2018179(-) (recX) [Staphylococcus aureus strain BSN57]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATTCAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTTTATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGACCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P66002

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996