Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | RYQ61_RS01105 | Genome accession | NZ_CP136799 |
| Coordinates | 213070..215322 (+) | Length | 750 a.a. |
| NCBI ID | WP_102567856.1 | Uniprot ID | - |
| Organism | Streptococcus intermedius strain XH2169 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 208070..220322
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RYQ61_RS01080 (RYQ61_01080) | - | 208098..209390 (+) | 1293 | WP_102567858.1 | ABC transporter permease | - |
| RYQ61_RS01085 (RYQ61_01085) | - | 209402..210049 (+) | 648 | WP_003071962.1 | ABC transporter ATP-binding protein | - |
| RYQ61_RS01090 (RYQ61_01090) | - | 210073..211461 (+) | 1389 | WP_003071961.1 | ABC transporter permease | - |
| RYQ61_RS01095 (RYQ61_01095) | - | 211905..212447 (-) | 543 | WP_003077029.1 | ClbS/DfsB family four-helix bundle protein | - |
| RYQ61_RS01100 (RYQ61_01100) | - | 212600..212830 (-) | 231 | WP_003023686.1 | DUF1797 family protein | - |
| RYQ61_RS01105 (RYQ61_01105) | clpE | 213070..215322 (+) | 2253 | WP_102567856.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| RYQ61_RS01110 (RYQ61_01110) | - | 215396..216001 (-) | 606 | WP_048786205.1 | GyrI-like domain-containing protein | - |
| RYQ61_RS01115 (RYQ61_01115) | - | 216061..216954 (-) | 894 | WP_102567855.1 | YafY family protein | - |
| RYQ61_RS01120 (RYQ61_01120) | - | 217111..217560 (+) | 450 | WP_102567854.1 | NUDIX hydrolase | - |
| RYQ61_RS01125 (RYQ61_01125) | - | 217624..217923 (+) | 300 | WP_003071940.1 | DUF1827 family protein | - |
| RYQ61_RS01130 (RYQ61_01130) | - | 217998..220052 (-) | 2055 | WP_102567853.1 | sodium:proton antiporter | - |
| RYQ61_RS01135 (RYQ61_01135) | - | 220064..220318 (-) | 255 | WP_003077046.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 750 a.a. Molecular weight: 83847.96 Da Isoelectric Point: 5.1059
>NTDB_id=892689 RYQ61_RS01105 WP_102567856.1 213070..215322(+) (clpE) [Streptococcus intermedius strain XH2169]
MLCQNCKINESTIHLYTNVNGKQHQVDLCQNCYQIMKTDPNNALFRGMTNMNNQNNLDPFDDFFSNIGNFQNHQEPQTPP
TQSGGGYGNGGYGSNQGNSTRQQAPQQPKGLLEEFGINVTEFARRGEIDPVIGRDEEIVRVIEILNRRTKNNPVLIGEPG
VGKTAVVEGLAQKIVDGDVPHKLQGKEVIRLDVVSLVQGTGIRGQFEERMQKLMNEIRSRQDVILFIDEIHEIVGAGSAG
DGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILKGIQKKYEDYHHVKYTDDAI
EAAAVLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLVEAENLKAQATRDEDFEKAAYFRDQIAKYKEMQ
QNKMADQDTPLISEKTIEHIIEQKTNIPVGDLKEKEQSQLISLADDLKTHVIGQDDAVDKIAKAIRRNRVGLGTPNRPIG
SFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKLVGAPPGYVGYEEAGQLTERVRRNPYSLILLDEI
EKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEANVGFGAAREGRTNSVIGELGNFFSPEFMNRFD
GIIEFKSLSKENLLQIVDLMLKDVNERLATNDIYLDVTDKVKEKLVNLGYDPKMGARPLRRTIQDHIEDAITDYYLEHPS
DKELKAIMTSNGKIVIKPAKNSENKSNKES
MLCQNCKINESTIHLYTNVNGKQHQVDLCQNCYQIMKTDPNNALFRGMTNMNNQNNLDPFDDFFSNIGNFQNHQEPQTPP
TQSGGGYGNGGYGSNQGNSTRQQAPQQPKGLLEEFGINVTEFARRGEIDPVIGRDEEIVRVIEILNRRTKNNPVLIGEPG
VGKTAVVEGLAQKIVDGDVPHKLQGKEVIRLDVVSLVQGTGIRGQFEERMQKLMNEIRSRQDVILFIDEIHEIVGAGSAG
DGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILKGIQKKYEDYHHVKYTDDAI
EAAAVLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLVEAENLKAQATRDEDFEKAAYFRDQIAKYKEMQ
QNKMADQDTPLISEKTIEHIIEQKTNIPVGDLKEKEQSQLISLADDLKTHVIGQDDAVDKIAKAIRRNRVGLGTPNRPIG
SFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKLVGAPPGYVGYEEAGQLTERVRRNPYSLILLDEI
EKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEANVGFGAAREGRTNSVIGELGNFFSPEFMNRFD
GIIEFKSLSKENLLQIVDLMLKDVNERLATNDIYLDVTDKVKEKLVNLGYDPKMGARPLRRTIQDHIEDAITDYYLEHPS
DKELKAIMTSNGKIVIKPAKNSENKSNKES
Nucleotide
Download Length: 2253 bp
>NTDB_id=892689 RYQ61_RS01105 WP_102567856.1 213070..215322(+) (clpE) [Streptococcus intermedius strain XH2169]
ATGCTTTGTCAAAACTGTAAAATAAATGAATCTACCATTCATCTTTACACAAATGTTAATGGGAAACAACATCAAGTTGA
CCTCTGTCAAAATTGTTATCAAATCATGAAAACGGATCCAAACAATGCCTTATTTCGTGGCATGACCAATATGAATAATC
AAAACAACCTAGACCCATTTGATGATTTCTTTAGCAATATAGGGAATTTTCAAAATCATCAAGAACCGCAGACTCCTCCT
ACTCAATCAGGTGGTGGATATGGCAATGGAGGCTATGGCTCCAATCAAGGCAATAGTACACGCCAACAAGCACCACAGCA
ACCTAAAGGTCTCCTAGAAGAATTCGGTATCAATGTAACTGAATTTGCTCGGCGTGGTGAAATTGACCCCGTGATTGGTC
GCGATGAGGAAATTGTTCGTGTTATTGAAATCCTTAATCGTAGAACGAAGAACAACCCTGTCCTCATCGGAGAGCCCGGT
GTCGGTAAAACAGCAGTTGTCGAAGGCTTGGCTCAGAAAATTGTAGACGGTGATGTGCCACATAAACTCCAAGGCAAAGA
AGTTATCCGCTTAGATGTCGTTAGCTTGGTTCAAGGAACTGGTATCCGTGGTCAATTTGAAGAACGAATGCAAAAACTCA
TGAACGAAATTCGCTCTCGTCAGGATGTGATATTATTCATTGATGAAATTCACGAAATTGTTGGAGCTGGTTCTGCTGGT
GATGGAAATATGGATGCTGGAAACATTCTAAAACCAGCACTTGCTCGCGGTGAACTCCAATTAGTTGGTGCCACAACTCT
CAATGAATACCGGATTATCGAAAAAGATGCTGCACTGGAACGCCGTATGCAGCCTGTAAAAGTTGATGAACCAACAGTTG
AAGAAACGATCACTATCCTCAAAGGTATTCAAAAGAAATACGAAGACTATCACCACGTCAAATACACCGACGATGCCATT
GAAGCAGCAGCTGTCTTGTCCAATCGGTATATCCAAGATCGCTTCTTGCCTGATAAGGCCATTGACTTGCTAGATGAAGC
AGGCTCTAAGATGAATCTGACACTTAACTTTGTCGATCCAAAAGTCATTGATCAACGATTGGTAGAAGCTGAAAATCTCA
AGGCACAAGCTACTCGTGATGAAGATTTTGAAAAAGCTGCTTATTTCCGTGACCAAATTGCCAAATACAAAGAAATGCAG
CAAAATAAAATGGCTGATCAAGATACGCCTCTTATCAGTGAAAAAACCATTGAACATATCATTGAGCAAAAGACCAATAT
TCCAGTTGGCGACTTGAAAGAAAAGGAACAATCACAATTGATTAGTCTGGCTGATGATTTGAAAACTCATGTCATTGGTC
AAGATGATGCTGTTGATAAAATTGCCAAAGCTATTCGCCGTAATCGAGTTGGACTAGGTACACCAAACCGACCAATTGGT
TCTTTCCTTTTTGTTGGGCCAACCGGTGTCGGCAAAACAGAACTTTCTAAACAACTAGCGATTGAGCTCTTTGGTTCAGC
TGACAGCATGATTCGCTTTGATATGAGTGAGTATATGGAAAAACATAGCGTAGCAAAACTCGTCGGAGCGCCTCCAGGTT
ACGTTGGCTACGAAGAGGCTGGGCAATTAACAGAACGCGTACGTCGTAATCCTTATTCTCTCATTTTACTTGATGAAATA
GAAAAAGCTCACCCAGATGTCATGCACATGTTCTTGCAAGTACTGGATGACGGACGTCTGACAGATGGACAAGGTCGGAC
AGTCAGTTTCAAAGATACGATTATCATTATGACTTCCAACGCCGGTACTGGTAAAGTTGAAGCAAACGTCGGATTCGGTG
CAGCGCGTGAAGGACGAACCAATTCTGTTATCGGTGAATTAGGAAACTTCTTCAGTCCAGAATTTATGAACCGTTTTGAT
GGTATTATTGAGTTCAAATCTCTTAGCAAGGAAAATCTCCTACAAATCGTAGATTTGATGCTTAAAGATGTCAATGAACG
GCTTGCCACGAATGACATTTACCTAGATGTAACAGATAAAGTCAAGGAAAAATTAGTTAATCTTGGTTACGATCCGAAAA
TGGGAGCTCGTCCACTTCGTCGGACAATCCAAGATCACATTGAGGATGCTATCACTGACTACTATCTTGAACATCCAAGC
GACAAAGAGCTCAAAGCTATCATGACAAGTAATGGTAAGATTGTCATCAAACCAGCTAAAAACTCTGAGAATAAATCCAA
TAAAGAAAGCTAG
ATGCTTTGTCAAAACTGTAAAATAAATGAATCTACCATTCATCTTTACACAAATGTTAATGGGAAACAACATCAAGTTGA
CCTCTGTCAAAATTGTTATCAAATCATGAAAACGGATCCAAACAATGCCTTATTTCGTGGCATGACCAATATGAATAATC
AAAACAACCTAGACCCATTTGATGATTTCTTTAGCAATATAGGGAATTTTCAAAATCATCAAGAACCGCAGACTCCTCCT
ACTCAATCAGGTGGTGGATATGGCAATGGAGGCTATGGCTCCAATCAAGGCAATAGTACACGCCAACAAGCACCACAGCA
ACCTAAAGGTCTCCTAGAAGAATTCGGTATCAATGTAACTGAATTTGCTCGGCGTGGTGAAATTGACCCCGTGATTGGTC
GCGATGAGGAAATTGTTCGTGTTATTGAAATCCTTAATCGTAGAACGAAGAACAACCCTGTCCTCATCGGAGAGCCCGGT
GTCGGTAAAACAGCAGTTGTCGAAGGCTTGGCTCAGAAAATTGTAGACGGTGATGTGCCACATAAACTCCAAGGCAAAGA
AGTTATCCGCTTAGATGTCGTTAGCTTGGTTCAAGGAACTGGTATCCGTGGTCAATTTGAAGAACGAATGCAAAAACTCA
TGAACGAAATTCGCTCTCGTCAGGATGTGATATTATTCATTGATGAAATTCACGAAATTGTTGGAGCTGGTTCTGCTGGT
GATGGAAATATGGATGCTGGAAACATTCTAAAACCAGCACTTGCTCGCGGTGAACTCCAATTAGTTGGTGCCACAACTCT
CAATGAATACCGGATTATCGAAAAAGATGCTGCACTGGAACGCCGTATGCAGCCTGTAAAAGTTGATGAACCAACAGTTG
AAGAAACGATCACTATCCTCAAAGGTATTCAAAAGAAATACGAAGACTATCACCACGTCAAATACACCGACGATGCCATT
GAAGCAGCAGCTGTCTTGTCCAATCGGTATATCCAAGATCGCTTCTTGCCTGATAAGGCCATTGACTTGCTAGATGAAGC
AGGCTCTAAGATGAATCTGACACTTAACTTTGTCGATCCAAAAGTCATTGATCAACGATTGGTAGAAGCTGAAAATCTCA
AGGCACAAGCTACTCGTGATGAAGATTTTGAAAAAGCTGCTTATTTCCGTGACCAAATTGCCAAATACAAAGAAATGCAG
CAAAATAAAATGGCTGATCAAGATACGCCTCTTATCAGTGAAAAAACCATTGAACATATCATTGAGCAAAAGACCAATAT
TCCAGTTGGCGACTTGAAAGAAAAGGAACAATCACAATTGATTAGTCTGGCTGATGATTTGAAAACTCATGTCATTGGTC
AAGATGATGCTGTTGATAAAATTGCCAAAGCTATTCGCCGTAATCGAGTTGGACTAGGTACACCAAACCGACCAATTGGT
TCTTTCCTTTTTGTTGGGCCAACCGGTGTCGGCAAAACAGAACTTTCTAAACAACTAGCGATTGAGCTCTTTGGTTCAGC
TGACAGCATGATTCGCTTTGATATGAGTGAGTATATGGAAAAACATAGCGTAGCAAAACTCGTCGGAGCGCCTCCAGGTT
ACGTTGGCTACGAAGAGGCTGGGCAATTAACAGAACGCGTACGTCGTAATCCTTATTCTCTCATTTTACTTGATGAAATA
GAAAAAGCTCACCCAGATGTCATGCACATGTTCTTGCAAGTACTGGATGACGGACGTCTGACAGATGGACAAGGTCGGAC
AGTCAGTTTCAAAGATACGATTATCATTATGACTTCCAACGCCGGTACTGGTAAAGTTGAAGCAAACGTCGGATTCGGTG
CAGCGCGTGAAGGACGAACCAATTCTGTTATCGGTGAATTAGGAAACTTCTTCAGTCCAGAATTTATGAACCGTTTTGAT
GGTATTATTGAGTTCAAATCTCTTAGCAAGGAAAATCTCCTACAAATCGTAGATTTGATGCTTAAAGATGTCAATGAACG
GCTTGCCACGAATGACATTTACCTAGATGTAACAGATAAAGTCAAGGAAAAATTAGTTAATCTTGGTTACGATCCGAAAA
TGGGAGCTCGTCCACTTCGTCGGACAATCCAAGATCACATTGAGGATGCTATCACTGACTACTATCTTGAACATCCAAGC
GACAAAGAGCTCAAAGCTATCATGACAAGTAATGGTAAGATTGTCATCAAACCAGCTAAAAACTCTGAGAATAAATCCAA
TAAAGAAAGCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus pneumoniae Rx1 |
86.418 |
100 |
0.865 |
| clpE | Streptococcus pneumoniae D39 |
86.418 |
100 |
0.865 |
| clpE | Streptococcus pneumoniae R6 |
86.418 |
100 |
0.865 |
| clpE | Streptococcus pneumoniae TIGR4 |
86.418 |
100 |
0.865 |
| clpE | Streptococcus mutans UA159 |
84.483 |
100 |
0.849 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
78.003 |
98.8 |
0.771 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
51.118 |
89.467 |
0.457 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.546 |
86.933 |
0.413 |
| clpC | Streptococcus pneumoniae Rx1 |
48.47 |
82.8 |
0.401 |
| clpC | Streptococcus pneumoniae D39 |
48.47 |
82.8 |
0.401 |
| clpC | Streptococcus pneumoniae TIGR4 |
48.309 |
82.8 |
0.4 |
| clpC | Streptococcus thermophilus LMD-9 |
47.191 |
83.067 |
0.392 |
| clpC | Streptococcus mutans UA159 |
46.372 |
84.533 |
0.392 |
| clpC | Streptococcus thermophilus LMG 18311 |
47.115 |
83.2 |
0.392 |