Detailed information NTG0892448

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: AAHH81_RS00235
• Genome accession: NZ_CP152418
• Coordinates: 40046..40939 (+)
• Length: 297 a.a.
• NCBI ID: WP_000343888.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 20234287
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 35046..45939

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAHH81_RS00195 (AAHH81_00200)	-	35359..36528 (+)	1170	WP_000366376.1	pyridoxal phosphate-dependent aminotransferase	-
AAHH81_RS00200 (AAHH81_00205)	recO	36525..37295 (+)	771	WP_000616164.1	DNA repair protein RecO	Machinery gene
AAHH81_RS00205 (AAHH81_00210)	plsX	37292..38284 (+)	993	WP_000717456.1	phosphate acyltransferase PlsX	-
AAHH81_RS00210 (AAHH81_00215)	-	38290..38523 (+)	234	WP_000136447.1	acyl carrier protein	-
AAHH81_RS00215 (AAHH81_00220)	-	38560..38859 (+)	300	Protein_35	transposase family protein	-
AAHH81_RS00220 (AAHH81_00225)	blpU	39062..39292 (+)	231	WP_001093487.1	bacteriocin-like peptide BlpU	-
AAHH81_RS00225 (AAHH81_00230)	-	39295..39420 (+)	126	WP_000346297.1	PncF family bacteriocin immunity protein	-
AAHH81_RS00230 (AAHH81_00235)	-	39831..40025 (+)	195	WP_000756776.1	hypothetical protein	-
AAHH81_RS00235 (AAHH81_00240)	comR	40046..40939 (+)	894	WP_000343888.1	helix-turn-helix domain-containing protein	Regulator
AAHH81_RS00240 (AAHH81_00245)	-	41482..41778 (+)	297	WP_000837726.1	uberolysin/carnocyclin family circular bacteriocin	-
AAHH81_RS00245 (AAHH81_00250)	-	41785..42921 (+)	1137	WP_000698828.1	hypothetical protein	-
AAHH81_RS00250 (AAHH81_00255)	-	42918..43400 (+)	483	WP_001232094.1	stage II sporulation protein M	-
AAHH81_RS00255 (AAHH81_00260)	-	43397..43993 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
AAHH81_RS00260 (AAHH81_00265)	-	43974..44465 (+)	492	WP_000671990.1	hypothetical protein	-
AAHH81_RS00265 (AAHH81_00270)	-	44578..45883 (-)	1306	Protein_45	transposase	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 34517.01 Da
• Isoelectric Point: 4.6498

>NTDB_id=892448 AAHH81_RS00235 WP_000343888.1 40046..40939(+) (comR) [Streptococcus pneumoniae strain 20234287]
MDELKREIGYKIKTIRRSCGKTQIDICGDESELTIRQLARIENGQALATLPKLLLIADKLGVSLQNIVDVKVIEIPKGFL
KLKDELIHSQTYADKGRIERKEAILEEIYENYYENLPEEEQLIVDVTQARFDIYGSSDVTYGLGLVEEYFQQLLKKKYFS
VNDLLIIELYFFCCAMGLEDKEHFEELAQKVLLCSEYEDKASLVQMEKVLLSLFIQIQTEDSLIYIQTFEKIIAKTRHVF
YRPHLFLLKAKYALFVDKNILEAESFYEKAISLAELLDDQVLVQRILAEKQIDFPTT

Nucleotide

• Length: 894 bp

>NTDB_id=892448 AAHH81_RS00235 WP_000343888.1 40046..40939(+) (comR) [Streptococcus pneumoniae strain 20234287]
ATGGATGAGTTGAAACGTGAAATTGGTTATAAAATCAAAACTATTAGGCGATCTTGTGGAAAAACTCAGATAGATATTTG
TGGTGATGAATCAGAGTTGACGATTCGTCAGCTAGCACGTATTGAAAATGGGCAAGCTTTAGCAACACTTCCTAAATTAT
TATTGATTGCGGATAAACTTGGAGTATCATTACAGAATATTGTGGATGTTAAGGTTATAGAGATTCCAAAAGGATTCCTA
AAACTCAAAGATGAGCTGATTCATTCTCAAACCTACGCTGATAAGGGAAGAATCGAACGAAAAGAAGCTATACTTGAGGA
AATATATGAAAACTATTATGAGAATTTGCCTGAGGAAGAGCAGTTAATTGTGGATGTGACACAAGCTCGTTTTGATATTT
ATGGTAGTTCAGATGTGACCTACGGTTTAGGGTTAGTGGAAGAATATTTCCAGCAGTTATTAAAAAAGAAATATTTTTCT
GTAAATGATTTGTTGATTATTGAATTGTATTTCTTTTGTTGTGCTATGGGATTAGAAGATAAAGAACATTTTGAGGAGTT
AGCTCAAAAAGTATTGCTATGTTCAGAATATGAAGATAAGGCTAGCCTAGTTCAAATGGAAAAAGTTCTTCTGAGCCTAT
TTATCCAAATTCAGACAGAAGATAGTCTGATATATATTCAAACATTTGAGAAAATTATTGCTAAAACAAGACATGTTTTT
TACCGACCTCATCTATTTTTGCTAAAGGCAAAATATGCTTTATTTGTAGACAAGAATATTTTAGAGGCAGAAAGTTTCTA
TGAAAAGGCGATTTCTCTAGCAGAATTGCTAGACGATCAGGTATTAGTTCAGAGAATTTTAGCAGAAAAACAGATAGATT
TCCCAACAACCTGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-289)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	36.667	100	0.37