Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   RVY84_RS05945 Genome accession   NZ_CP136661
Coordinates   1160696..1160872 (+) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus sp. 3P20     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1155696..1165872
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RVY84_RS05925 (RVY84_05915) clpB 1156033..1158633 (+) 2601 WP_202295257.1 ATP-dependent chaperone ClpB -
  RVY84_RS05930 (RVY84_05920) - 1158666..1158848 (-) 183 WP_001211116.1 YjzD family protein -
  RVY84_RS05935 (RVY84_05925) - 1159006..1159740 (+) 735 WP_000028702.1 hydrolase -
  RVY84_RS05940 (RVY84_05930) - 1159770..1160642 (+) 873 WP_033668777.1 NAD-dependent epimerase/dehydratase family protein -
  RVY84_RS05945 (RVY84_05935) comZ 1160696..1160872 (+) 177 WP_009879752.1 ComZ family protein Regulator
  RVY84_RS05950 (RVY84_05940) fabH 1161263..1162195 (+) 933 WP_001100539.1 beta-ketoacyl-ACP synthase III -
  RVY84_RS05955 (RVY84_05945) fabF 1162227..1163465 (+) 1239 WP_000412652.1 beta-ketoacyl-ACP synthase II -
  RVY84_RS05960 (RVY84_05950) - 1163572..1164360 (+) 789 WP_000513289.1 DUF2268 domain-containing protein -
  RVY84_RS05965 (RVY84_05955) - 1164504..1165250 (+) 747 WP_000966134.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=892311 RVY84_RS05945 WP_009879752.1 1160696..1160872(+) (comZ) [Bacillus sp. 3P20]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=892311 RVY84_RS05945 WP_009879752.1 1160696..1160872(+) (comZ) [Bacillus sp. 3P20]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586