Detailed information NTG0892145

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AAC934_RS13270
• Genome accession: NZ_CP152362
• Coordinates: 2581293..2582420 (+)
• Length: 375 a.a.
• NCBI ID: WP_031315220.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain LP
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2576293..2587420

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAC934_RS13255 (AAC934_13255)	-	2576371..2576549 (-)	179	Protein_2574	hypothetical protein	-
AAC934_RS13260 (AAC934_13260)	-	2577160..2579025 (+)	1866	WP_167408301.1	DUF4365 domain-containing protein	-
AAC934_RS13265 (AAC934_13265)	-	2579464..2580549 (-)	1086	WP_033884469.1	glycosyl hydrolase	-
AAC934_RS13270 (AAC934_13270)	rapC	2581293..2582420 (+)	1128	WP_031315220.1	response regulator aspartate phosphatase RapE	Regulator
AAC934_RS13275 (AAC934_13275)	phrE	2582410..2582544 (+)	135	WP_014114495.1	phosphatase RapE inhibitor PhrE	-
AAC934_RS13280 (AAC934_13280)	-	2582654..2582813 (+)	160	Protein_2579	hypothetical protein	-
AAC934_RS13285 (AAC934_13285)	-	2583182..2584948 (+)	1767	WP_342623051.1	T7SS effector LXG polymorphic toxin	-
AAC934_RS13290 (AAC934_13290)	-	2584962..2585426 (+)	465	WP_015251659.1	SMI1/KNR4 family protein	-
AAC934_RS13295 (AAC934_13295)	-	2585629..2586351 (-)	723	WP_342623053.1	NPP1 family protein	-
AAC934_RS13300 (AAC934_13300)	cwlA	2586545..2587365 (-)	821	Protein_2583	N-acetylmuramoyl-L-alanine amidase	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44621.50 Da
• Isoelectric Point: 8.0396

>NTDB_id=892145 AAC934_RS13270 WP_031315220.1 2581293..2582420(+) (rapC) [Bacillus subtilis strain LP]
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTLPSDENRMELSEYL
KKIEGHKKKLDNMRAYYYNFFRGMYEFRNGKYTKAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVQYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAVDFKDELFMNLFEALDVLYIRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI

Nucleotide

• Length: 1128 bp

>NTDB_id=892145 AAC934_RS13270 WP_031315220.1 2581293..2582420(+) (rapC) [Bacillus subtilis strain LP]
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAGTTCAACGTAACTGA
TGCTGAAATGTTAAAAGCTGAAATCGAACGTGATATAGAGGTTATGGAAGAAGATCAAGACTTGCTTATTTATTATCAAC
TAATGGCCTTTCGACATAAAATTATGTTGGAATACACGCTGCCATCTGATGAAAACCGAATGGAACTTTCAGAATATTTA
AAGAAAATCGAAGGGCATAAGAAGAAGCTAGACAATATGCGGGCGTATTATTATAACTTCTTCCGCGGAATGTATGAGTT
TAGAAACGGTAAATACACAAAGGCCATTACATATTACAAAAAAGCTGAACGCAAAATTCCAACGATCTCCGACAAGATTG
AAAAAGCTGAGTTTTATTTTAAGTTATCCGAAGTCTATTATCATATGAAAATGACTCACATCTCAATGCACTACGCTGAA
CTTTCATACAACATCTATAAAAAACATGAACTTTATTCTGTTCGGCGTATACAGTGCCATTTTGTCATTGCCGGTAACTA
TGATGACCTTGAAAATCATGAAAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCCGAGCTGCTTAAAAGTAAAA
ATACTCACATCTATGCCACTGCATTTTTCAATCTCGGCAACTGCTATCACAAAATGGACAACTTAAATAAGGCTGCACGT
TACATCGAACAAGCCTTGGTTCAATACAGAAAAATAAACTCTGACGTACTTCCGCAAGCTTATCATGACCTAGCGTTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATAAGAAGTGCTGTAGATTTTAAAGACG
AACTTTTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATAAGAAATGGCGATACACCTAAACTCCTCAACATTTTC
TCTCGTTTAGAGAACGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

• Tetratricopeptide repeat (TPR_12) (184-246)

• Tetratricopeptide repeat (TPR_8) (259-286)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	40.633	100	0.411
rapF	Bacillus subtilis subsp. subtilis str. 168	37.931	100	0.381