Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   RZ534_RS05770 Genome accession   NZ_CP136643
Coordinates   1144812..1145009 (+) Length   65 a.a.
NCBI ID   WP_008348507.1    Uniprot ID   A0A9X0FWQ1
Organism   Bacillus altitudinis strain RS1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1139812..1150009
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RZ534_RS05740 (RZ534_05740) - 1140212..1140391 (+) 180 WP_008348517.1 YjzC family protein -
  RZ534_RS05745 (RZ534_05745) - 1140561..1141826 (+) 1266 WP_065460140.1 MFS transporter -
  RZ534_RS05750 (RZ534_05750) - 1141946..1142140 (-) 195 WP_008348514.1 YjzD family protein -
  RZ534_RS05755 (RZ534_05755) - 1142353..1143093 (+) 741 WP_007499048.1 hypothetical protein -
  RZ534_RS05760 (RZ534_05760) - 1143169..1143744 (+) 576 WP_065460142.1 nad binding enzyme -
  RZ534_RS05765 (RZ534_05765) med 1143835..1144800 (+) 966 WP_008348509.1 BMP family ABC transporter substrate-binding protein Regulator
  RZ534_RS05770 (RZ534_05770) comZ 1144812..1145009 (+) 198 WP_008348507.1 ComZ family protein Regulator
  RZ534_RS05775 (RZ534_05775) - 1145213..1145446 (-) 234 WP_008348506.1 hypothetical protein -
  RZ534_RS05780 (RZ534_05780) - 1145616..1146554 (+) 939 WP_024720058.1 beta-ketoacyl-ACP synthase III -
  RZ534_RS05785 (RZ534_05785) fabF 1146576..1147817 (+) 1242 WP_060780964.1 beta-ketoacyl-ACP synthase II -
  RZ534_RS05790 (RZ534_05790) - 1147895..1148689 (+) 795 WP_317329036.1 DUF2268 domain-containing protein -
  RZ534_RS05795 (RZ534_05795) - 1148860..1149840 (+) 981 WP_008348498.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7318.37 Da        Isoelectric Point: 4.3178

>NTDB_id=892120 RZ534_RS05770 WP_008348507.1 1144812..1145009(+) (comZ) [Bacillus altitudinis strain RS1]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPQALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=892120 RZ534_RS05770 WP_008348507.1 1144812..1145009(+) (comZ) [Bacillus altitudinis strain RS1]
ATGCAGCACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGAATTCAGCTTGATCCACAAGCACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

93.846

0.662