Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   RZ534_RS05385 Genome accession   NZ_CP136643
Coordinates   1063576..1064526 (+) Length   316 a.a.
NCBI ID   WP_039167438.1    Uniprot ID   -
Organism   Bacillus altitudinis strain RS1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1058576..1069526
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RZ534_RS05365 (RZ534_05365) - 1059809..1060291 (+) 483 WP_008348662.1 hypothetical protein -
  RZ534_RS05370 (RZ534_05370) - 1060322..1061761 (-) 1440 WP_317329015.1 PLP-dependent aminotransferase family protein -
  RZ534_RS05375 (RZ534_05375) - 1061905..1063074 (+) 1170 WP_081114756.1 MFS transporter -
  RZ534_RS05380 (RZ534_05380) - 1063138..1063416 (+) 279 WP_024720011.1 barstar family protein -
  RZ534_RS05385 (RZ534_05385) ceuB 1063576..1064526 (+) 951 WP_039167438.1 ABC transporter permease Machinery gene
  RZ534_RS05390 (RZ534_05390) - 1064519..1065469 (+) 951 WP_019743340.1 iron chelate uptake ABC transporter family permease subunit -
  RZ534_RS05395 (RZ534_05395) - 1065460..1066218 (+) 759 WP_317329017.1 ATP-binding cassette domain-containing protein -
  RZ534_RS05400 (RZ534_05400) - 1066241..1067185 (+) 945 WP_050827120.1 siderophore ABC transporter substrate-binding protein -
  RZ534_RS05405 (RZ534_05405) - 1067324..1068280 (+) 957 WP_008348636.1 LCP family protein -
  RZ534_RS05410 (RZ534_05410) - 1068316..1068750 (-) 435 WP_159145573.1 enoyl-CoA hydratase -
  RZ534_RS05415 (RZ534_05415) - 1068836..1069198 (-) 363 WP_008348633.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34959.31 Da        Isoelectric Point: 9.7475

>NTDB_id=892116 RZ534_RS05385 WP_039167438.1 1063576..1064526(+) (ceuB) [Bacillus altitudinis strain RS1]
MKLYQLSLLFLCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=892116 RZ534_RS05385 WP_039167438.1 1063576..1064526(+) (ceuB) [Bacillus altitudinis strain RS1]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTTTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATTATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTTATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAAAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTACTCGGAAGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494