Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   RZ534_RS04365 Genome accession   NZ_CP136643
Coordinates   875384..876175 (+) Length   263 a.a.
NCBI ID   WP_317328922.1    Uniprot ID   -
Organism   Bacillus altitudinis strain RS1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 870384..881175
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RZ534_RS04330 (RZ534_04330) - 870471..871019 (+) 549 WP_008341670.1 thioredoxin family protein -
  RZ534_RS04335 (RZ534_04335) - 871359..871826 (+) 468 WP_007496690.1 thiol-disulfide oxidoreductase DCC family protein -
  RZ534_RS04340 (RZ534_04340) - 871862..873118 (-) 1257 WP_052320913.1 transcriptional regulator -
  RZ534_RS04345 (RZ534_04345) - 873389..873976 (+) 588 WP_024720283.1 nitroreductase -
  RZ534_RS04350 (RZ534_04350) - 874012..874167 (-) 156 WP_008341997.1 YfhD family protein -
  RZ534_RS04355 (RZ534_04355) - 874229..874339 (-) 111 WP_017358836.1 YfhE family protein -
  RZ534_RS04360 (RZ534_04360) - 874392..875288 (-) 897 WP_317328921.1 TIGR01777 family oxidoreductase -
  RZ534_RS04365 (RZ534_04365) recX 875384..876175 (+) 792 WP_317328922.1 recombination regulator RecX Regulator
  RZ534_RS04370 (RZ534_04370) - 876179..876493 (+) 315 WP_007496702.1 YfhH family protein -
  RZ534_RS04375 (RZ534_04375) - 876720..876893 (-) 174 WP_003217811.1 YpzG family protein -
  RZ534_RS04380 (RZ534_04380) - 876919..877068 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  RZ534_RS04385 (RZ534_04385) - 877185..877457 (+) 273 WP_017366871.1 YfhJ family protein -
  RZ534_RS04390 (RZ534_04390) - 877759..878742 (+) 984 WP_008341983.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30635.07 Da        Isoelectric Point: 7.0790

>NTDB_id=892111 RZ534_RS04365 WP_317328922.1 875384..876175(+) (recX) [Bacillus altitudinis strain RS1]
MPYITKISAQKNSTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPNDLQLEE
AVKQVLKMVKKEKNRSAKEIEQRIKLQLQRKGFSFDIIDKALQEAYDGQEEEKEEEALHYMLEKAKRKVGYDGSFEKKMK
VKQFLYRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=892111 RZ534_RS04365 WP_317328922.1 875384..876175(+) (recX) [Bacillus altitudinis strain RS1]
ATGCCCTATATTACGAAAATCTCTGCTCAGAAAAACAGTACAGAACGCGTGAACATCTTTCTTGATGAAAAGTACGCTTT
TAGCGTTGATCTAGATGTGCTCGTCCAGCATGATTTGAAAAAGGGAAAAGAGCTGGACGAAGCCGATATCATAGAGATTC
AATTCGGTGATGCAGTAAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCGTATCGGATGAGATCAGTGAAAGAAGTC
ACCGATTATTTGACGAAAAAAGAAATACCAGCACCTGCTATTAGTGAAATTATACACAAATTAAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCGTATGTAAGCACCCACCGAAAAACGAATAGCAAAGGCCCGTCAGTGCTAAAAAAAG
AATTAAAGCTGAAAGGCATAGACGATGACACCATCGAACAAGCACTATCGCAATATCCGAATGATTTGCAGCTAGAGGAA
GCAGTGAAACAAGTGCTGAAGATGGTTAAGAAAGAGAAAAACCGGTCCGCAAAAGAAATTGAACAGCGTATCAAATTGCA
GCTTCAGCGAAAAGGATTTTCATTTGATATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTTCACTATATGCTTGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAGAAAAAAATGAAA
GTGAAGCAATTCCTTTACCGAAAAGGATTTGATCTTGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.118

100

0.631