Detailed information NTG0892054

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: AAC934_RS01705
• Genome accession: NZ_CP152362
• Coordinates: 304097..305218 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain LP
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 299097..310218

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAC934_RS01680 (AAC934_01680)	ycdA	299102..300166 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
AAC934_RS01685 (AAC934_01685)	-	300189..300320 (-)	132	WP_003246334.1	hypothetical protein	-
AAC934_RS01690 (AAC934_01690)	ycdB	300494..301915 (+)	1422	WP_339175746.1	YcdB/YcdC domain-containing protein	-
AAC934_RS01695 (AAC934_01695)	ycdC	302102..303463 (+)	1362	WP_038428124.1	YcdB/YcdC domain-containing protein	-
AAC934_RS01700 (AAC934_01700)	cwlK	303471..303974 (-)	504	WP_029317221.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
AAC934_RS01705 (AAC934_01705)	rapF	304097..305218 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
AAC934_RS01710 (AAC934_01710)	ycdF	305325..306101 (+)	777	WP_015382686.1	SDR family oxidoreductase	-
AAC934_RS01715 (AAC934_01715)	ycdG	306126..307811 (+)	1686	WP_038427325.1	alpha-glucosidase	-
AAC934_RS01720 (AAC934_01720)	znuA	307999..308958 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
AAC934_RS01725 (AAC934_01725)	znuC	309013..309708 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=892054 AAC934_RS01705 WP_015715201.1 304097..305218(+) (rapF) [Bacillus subtilis strain LP]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=892054 AAC934_RS01705 WP_015715201.1 304097..305218(+) (rapF) [Bacillus subtilis strain LP]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAATCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCAGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405