Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   RAS18_RS07705 Genome accession   NZ_CP136635
Coordinates   1495746..1496321 (+) Length   191 a.a.
NCBI ID   WP_003327252.1    Uniprot ID   -
Organism   Bacillus atrophaeus subsp. globigii strain Hab-5     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1490746..1501321
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RAS18_RS07675 dapD 1490865..1491575 (+) 711 WP_094231940.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  RAS18_RS07680 - 1491648..1492772 (+) 1125 WP_094231941.1 N-acetyldiaminopimelate deacetylase -
  RAS18_RS07685 - 1492833..1493078 (+) 246 WP_003327256.1 YkuS family protein -
  RAS18_RS07690 - 1493117..1493920 (-) 804 WP_268515901.1 mechanosensitive ion channel family protein -
  RAS18_RS07695 ahpA 1494170..1494712 (+) 543 WP_003327254.1 biofilm-specific peroxidase AhpA -
  RAS18_RS07700 - 1494797..1495255 (+) 459 WP_003327253.1 TlpA disulfide reductase family protein -
  RAS18_RS07705 rok 1495746..1496321 (+) 576 WP_003327252.1 transcriptional regulator Rok Regulator
  RAS18_RS07710 - 1496367..1497326 (-) 960 WP_061571435.1 hypothetical protein -
  RAS18_RS07715 - 1497470..1498054 (+) 585 WP_406621804.1 molybdenum cofactor guanylyltransferase -
  RAS18_RS07720 - 1498126..1499145 (+) 1020 WP_214914852.1 MoeB/ThiF family adenylyltransferase -
  RAS18_RS07725 glp 1499164..1500456 (+) 1293 WP_406621805.1 gephyrin-like molybdotransferase Glp -
  RAS18_RS07730 mobB 1500417..1500941 (+) 525 WP_406621806.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21713.65 Da        Isoelectric Point: 9.8783

>NTDB_id=892026 RAS18_RS07705 WP_003327252.1 1495746..1496321(+) (rok) [Bacillus atrophaeus subsp. globigii strain Hab-5]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSSAAETKKDFRPERKSESLPVLAELAAQEIRSYQPQ
QASQPQPQSISSIPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQSL
IKMYPEVKKPYRGQYILEGEIASDSAENVTE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=892026 RAS18_RS07705 WP_003327252.1 1495746..1496321(+) (rok) [Bacillus atrophaeus subsp. globigii strain Hab-5]
ATGTTTAATGAGAGGGAAGCTTTACGCTTGCGTTTGGAACAGTTAAATGAGGCTGAGGTTAAAGTCATCCGTGAATATCA
AATAGAGCGTGACAAAATATATGCAAAACTAAGAGAGCTTGACCGCAATGGAAGCTCAGCAGCGGAAACAAAAAAAGATT
TTCGCCCTGAAAGAAAAAGTGAGTCTCTTCCTGTGCTGGCCGAGCTTGCAGCACAAGAGATCAGAAGCTATCAGCCGCAG
CAGGCATCACAGCCGCAGCCGCAATCCATCTCTTCTATTCCGGCGGGTATTCCGGACGGAACGACAAGAAGAAGAAGAGG
AACGGCAAGACCGGGTTCAAAGGCTGCAAAGCTTCGTGAAGCGGCAATCAAAACATTAAAACGCCATAACGCAGCGATCA
AAAGCTCTGAACTTCAAAAGGAAATTGAGAAGGAAAGCGGGCTTGAAATCCCTAATATGACAACGTTTATGCAAAGTTTA
ATTAAAATGTATCCGGAAGTGAAAAAGCCATATCGCGGCCAGTACATTTTAGAAGGCGAAATCGCTTCAGACTCTGCTGA
AAATGTGACTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.598

100

0.88