Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   RAS18_RS06120 Genome accession   NZ_CP136635
Coordinates   1226183..1226839 (+) Length   218 a.a.
NCBI ID   WP_010788243.1    Uniprot ID   -
Organism   Bacillus atrophaeus subsp. globigii strain Hab-5     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1221183..1231839
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RAS18_RS06090 oppF 1221405..1222322 (+) 918 WP_003327583.1 oligopeptide ABC transporter ATP-binding protein OppF -
  RAS18_RS06095 - 1222414..1222587 (+) 174 WP_406621682.1 hypothetical protein -
  RAS18_RS06100 - 1222720..1223901 (+) 1182 WP_406621978.1 putative glycoside hydrolase -
  RAS18_RS06105 - 1224051..1224629 (+) 579 WP_003327580.1 GNAT family N-acetyltransferase -
  RAS18_RS06110 spx 1224810..1225205 (+) 396 WP_003327578.1 transcriptional regulator Spx -
  RAS18_RS06115 - 1225241..1225903 (-) 663 WP_406621683.1 TerC family protein -
  RAS18_RS06120 mecA 1226183..1226839 (+) 657 WP_010788243.1 adaptor protein MecA Regulator
  RAS18_RS06125 coiA 1226999..1228165 (+) 1167 WP_406621684.1 competence protein CoiA family protein Machinery gene
  RAS18_RS06130 pepF 1228394..1230223 (+) 1830 WP_406621685.1 oligoendopeptidase F -
  RAS18_RS06135 - 1230259..1230426 (-) 168 WP_003327573.1 hypothetical protein -
  RAS18_RS06140 spxH 1230739..1231641 (-) 903 WP_061571230.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 26005.73 Da        Isoelectric Point: 3.9783

>NTDB_id=892019 RAS18_RS06120 WP_010788243.1 1226183..1226839(+) (mecA) [Bacillus atrophaeus subsp. globigii strain Hab-5]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEQADENLDALLDDFQKEEQADNQEEKEQKLQFVLRFDDFEDLISLSNLNVNGSKTTLYSFENR
YYLYVDFQEMSDEEVENQLSILLEYTYESSISIHRIEEYGKLIISEDVLDTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=892019 RAS18_RS06120 WP_010788243.1 1226183..1226839(+) (mecA) [Bacillus atrophaeus subsp. globigii strain Hab-5]
ATGGAAATAGAAAGAATAAACGAACATACTGTAAAGTTTTATATGTCATATGGAGATATTGAAGACCGCGGTTTCGACAG
AGAAGAGATTTGGTATAACCGTGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTTCATGAGGAAGAAGAAT
TCGCTGTAGAAGGTCCTCTTTGGATTCAAGTTCAGGCACTCGATAAAGGCTTGGAGATTATCGTTACAAAAGCCCAGCTT
TCTAAAGACGGACAAAAGCTCGAACTGCCGATACCTGAAGATAAAAAGCAAGAACAAGCAGATGAGAATCTCGATGCCTT
GCTGGATGATTTTCAAAAAGAAGAGCAAGCCGACAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTCGTCTTGCGGTTTG
ATGATTTTGAGGACTTGATTTCTCTTTCAAATTTGAACGTAAACGGAAGCAAAACGACGCTTTATTCGTTTGAAAACCGG
TATTATTTATATGTAGATTTTCAAGAAATGTCTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTAGAGTACACATA
TGAATCCTCAATCAGCATACACCGCATCGAAGAATACGGCAAGCTGATTATTTCAGAGGATGTTCTGGATACAATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

92.661

100

0.927