Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   AAEU35_RS09145 Genome accession   NZ_CP152294
Coordinates   1811005..1811775 (+) Length   256 a.a.
NCBI ID   WP_004254655.1    Uniprot ID   Q9CE51
Organism   Lactococcus lactis strain Q13     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1806005..1816775
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAEU35_RS09115 rplK 1806380..1806805 (+) 426 WP_004254643.1 50S ribosomal protein L11 -
  AAEU35_RS09120 rplA 1807143..1807832 (+) 690 WP_004254644.1 50S ribosomal protein L1 -
  AAEU35_RS09125 - 1807911..1808255 (+) 345 WP_004254648.1 hypothetical protein -
  AAEU35_RS09130 - 1808267..1808488 (-) 222 WP_010906257.1 hypothetical protein -
  AAEU35_RS09135 - 1808501..1808902 (-) 402 WP_058203740.1 HIT family protein -
  AAEU35_RS09140 - 1809181..1810986 (+) 1806 WP_317141325.1 glycerophosphoryl diester phosphodiesterase membrane domain-containing protein -
  AAEU35_RS09145 pptA 1811005..1811775 (+) 771 WP_004254655.1 ABC transporter ATP-binding protein Regulator
  AAEU35_RS09150 - 1811768..1812787 (+) 1020 WP_004254656.1 ABC transporter permease -
  AAEU35_RS09155 - 1812826..1813452 (-) 627 WP_058220686.1 copper homeostasis protein CutC -
  AAEU35_RS09160 - 1813665..1814846 (-) 1182 WP_058223011.1 site-specific integrase -
  AAEU35_RS09165 - 1814937..1815242 (-) 306 WP_058223010.1 bacteriocin immunity protein -
  AAEU35_RS09170 - 1815343..1815750 (-) 408 WP_270219650.1 hypothetical protein -

Sequence

Protein


Download         Length: 256 a.a.        Molecular weight: 28472.99 Da        Isoelectric Point: 4.5320

>NTDB_id=891842 AAEU35_RS09145 WP_004254655.1 1811005..1811775(+) (pptA) [Lactococcus lactis strain Q13]
MLKVTNLTGGYLGHPVLKDLNFEIKEGELVGLIGLNGAGKSTTIQEIIGLLTPYSGQIELDGLTLQQDLEGYRRKIGFIP
ETPSLYEELTLREHIEVTALAYGISVDLAFERAEKLLETFRLSDKLDWFPVNFSKGMKQKVMIICAFLVEPSLYIVDEPF
MGLDPLAIQDLIDLMIDMKKSGSSILMSTHILSTAEKFCDKFIVLHEGQVVAFGTVEELRTQFNQPKASLDEIYLALTKG
NIPNSKEVVEAGKSNE

Nucleotide


Download         Length: 771 bp        

>NTDB_id=891842 AAEU35_RS09145 WP_004254655.1 1811005..1811775(+) (pptA) [Lactococcus lactis strain Q13]
ATGTTAAAAGTAACAAATCTAACAGGTGGCTATTTGGGGCATCCTGTCTTAAAAGACCTTAATTTTGAAATTAAAGAAGG
TGAGTTAGTTGGACTCATTGGTTTAAATGGGGCAGGAAAATCGACGACAATTCAAGAAATTATTGGACTTTTGACTCCTT
ATTCTGGACAAATTGAATTAGACGGCTTAACTTTACAACAAGATTTAGAAGGCTATCGTAGAAAAATTGGTTTCATTCCA
GAAACACCAAGTTTGTATGAAGAATTGACTTTGCGTGAACATATTGAAGTGACAGCTTTAGCTTACGGGATTTCTGTTGA
CTTGGCTTTTGAACGTGCTGAAAAATTATTAGAAACTTTCCGCTTGAGTGATAAATTAGATTGGTTCCCTGTGAATTTTT
CAAAAGGGATGAAACAAAAAGTGATGATTATCTGCGCATTCTTAGTGGAACCTTCGCTCTATATTGTTGATGAACCTTTT
ATGGGACTTGACCCGCTTGCGATTCAGGATTTGATTGACTTGATGATTGACATGAAAAAATCTGGAAGTTCGATTTTAAT
GAGTACACATATCTTGTCCACAGCTGAAAAATTCTGTGATAAATTTATTGTTTTGCATGAAGGTCAAGTTGTTGCTTTTG
GAACAGTAGAAGAATTACGGACTCAATTTAATCAGCCTAAGGCAAGTTTAGATGAAATTTATCTTGCCTTAACAAAAGGA
AATATTCCAAACTCTAAAGAAGTTGTAGAGGCAGGAAAGTCAAATGAATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CE51

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

67.355

94.531

0.637
  pptA Streptococcus thermophilus LMD-9

66.942

94.531

0.633