Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RZV17_RS14815 Genome accession   NZ_CP136580
Coordinates   3482548..3482949 (-) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas cannabis strain DAR41331     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3477548..3487949
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RZV17_RS14800 (RZV17_14755) - 3479562..3481598 (-) 2037 WP_355604551.1 methyl-accepting chemotaxis protein -
  RZV17_RS14805 (RZV17_14760) - 3481638..3482168 (-) 531 WP_039413900.1 chemotaxis protein CheW -
  RZV17_RS14810 (RZV17_14765) - 3482168..3482530 (-) 363 WP_039413898.1 PleD family two-component system response regulator -
  RZV17_RS14815 (RZV17_14770) pilG 3482548..3482949 (-) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  RZV17_RS14820 (RZV17_14775) gshB 3483187..3484137 (+) 951 WP_047697318.1 glutathione synthase -
  RZV17_RS14825 (RZV17_14780) - 3484134..3485009 (+) 876 WP_166749097.1 energy transducer TonB -
  RZV17_RS14830 (RZV17_14785) - 3485068..3485226 (-) 159 Protein_2899 ADP-ribosylglycohydrolase family protein -
  RZV17_RS14835 (RZV17_14790) tsaB 3485223..3485942 (-) 720 WP_179454432.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=891699 RZV17_RS14815 WP_005913706.1 3482548..3482949(-) (pilG) [Xanthomonas cannabis strain DAR41331]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=891699 RZV17_RS14815 WP_005913706.1 3482548..3482949(-) (pilG) [Xanthomonas cannabis strain DAR41331]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGACTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGGTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTCATCATGTTGTCGTCCAAAGACGGCCTGTTCGACAAGGCACGTGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684