Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RZV16_RS15630 Genome accession   NZ_CP136578
Coordinates   3648273..3648674 (-) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas cannabis strain DAR82727     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3643273..3653674
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RZV16_RS15615 (RZV16_15560) - 3645287..3647323 (-) 2037 WP_228333951.1 methyl-accepting chemotaxis protein -
  RZV16_RS15620 (RZV16_15565) - 3647363..3647893 (-) 531 WP_039413900.1 chemotaxis protein CheW -
  RZV16_RS15625 (RZV16_15570) - 3647893..3648255 (-) 363 WP_039413898.1 response regulator -
  RZV16_RS15630 (RZV16_15575) pilG 3648273..3648674 (-) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  RZV16_RS15635 (RZV16_15580) gshB 3648912..3649862 (+) 951 WP_228333950.1 glutathione synthase -
  RZV16_RS15640 (RZV16_15585) - 3649859..3650734 (+) 876 WP_228333949.1 energy transducer TonB -
  RZV16_RS15645 (RZV16_15590) - 3650793..3650912 (-) 120 Protein_3061 ADP-ribosylglycohydrolase family protein -
  RZV16_RS15650 (RZV16_15595) tsaB 3650948..3651667 (-) 720 WP_228333948.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=891667 RZV16_RS15630 WP_005913706.1 3648273..3648674(-) (pilG) [Xanthomonas cannabis strain DAR82727]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=891667 RZV16_RS15630 WP_005913706.1 3648273..3648674(-) (pilG) [Xanthomonas cannabis strain DAR82727]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGGTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTCATCATGTTGTCGTCCAAGGATGGCCTGTTCGACAAGGCACGTGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684