Detailed information NTG0891275

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AAGG05_RS07080
• Genome accession: NZ_CP151934
• Coordinates: 1465343..1466368 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 8178 isolate T4048
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1460343..1471368

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAGG05_RS07050 (AAGG05_07055)	zapB	1460427..1460672 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
AAGG05_RS07055 (AAGG05_07060)	rraA	1460757..1461242 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AAGG05_RS07060 (AAGG05_07065)	menA	1461335..1462261 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AAGG05_RS07065 (AAGG05_07070)	hslU	1462328..1463659 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
AAGG05_RS07070 (AAGG05_07075)	hslV	1463669..1464199 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AAGG05_RS07075 (AAGG05_07080)	ftsN	1464292..1465251 (-)	960	WP_000068847.1	cell division protein FtsN	-
AAGG05_RS07080 (AAGG05_07085)	cytR	1465343..1466368 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AAGG05_RS07085 (AAGG05_07090)	priA	1466524..1468722 (-)	2199	WP_001314329.1	primosomal protein N'	Machinery gene
AAGG05_RS07090 (AAGG05_07095)	rpmE	1468925..1469137 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
AAGG05_RS07095 (AAGG05_07100)	yiiX	1469198..1469806 (-)	609	WP_021531743.1	YiiX family permuted papain-like enzyme	-
AAGG05_RS07100 (AAGG05_07105)	metJ	1469866..1470183 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=891275 AAGG05_RS07080 WP_000644904.1 1465343..1466368(-) (cytR) [Escherichia coli strain 8178 isolate T4048]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=891275 AAGG05_RS07080 WP_000644904.1 1465343..1466368(-) (cytR) [Escherichia coli strain 8178 isolate T4048]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTAAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628