Detailed information NTG0891215

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AAGG03_RS18895
• Genome accession: NZ_CP151932
• Coordinates: 3832206..3833231 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 8178 isolate T4039
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3827206..3838231

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAGG03_RS18865 (AAGG03_18870)	zapB	3827290..3827535 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
AAGG03_RS18870 (AAGG03_18875)	rraA	3827620..3828105 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AAGG03_RS18875 (AAGG03_18880)	menA	3828198..3829124 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AAGG03_RS18880 (AAGG03_18885)	hslU	3829191..3830522 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
AAGG03_RS18885 (AAGG03_18890)	hslV	3830532..3831062 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AAGG03_RS18890 (AAGG03_18895)	ftsN	3831155..3832114 (-)	960	WP_000068847.1	cell division protein FtsN	-
AAGG03_RS18895 (AAGG03_18900)	cytR	3832206..3833231 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AAGG03_RS18900 (AAGG03_18905)	priA	3833387..3835585 (-)	2199	WP_001314329.1	primosomal protein N'	Machinery gene
AAGG03_RS18905 (AAGG03_18910)	rpmE	3835788..3836000 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
AAGG03_RS18910 (AAGG03_18915)	yiiX	3836061..3836669 (-)	609	WP_021531743.1	YiiX family permuted papain-like enzyme	-
AAGG03_RS18915 (AAGG03_18920)	metJ	3836729..3837046 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=891215 AAGG03_RS18895 WP_000644904.1 3832206..3833231(-) (cytR) [Escherichia coli strain 8178 isolate T4039]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=891215 AAGG03_RS18895 WP_000644904.1 3832206..3833231(-) (cytR) [Escherichia coli strain 8178 isolate T4039]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTAAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628