Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   RYX39_RS06405 Genome accession   NZ_CP136430
Coordinates   1256440..1257096 (+) Length   218 a.a.
NCBI ID   WP_127695466.1    Uniprot ID   -
Organism   Bacillus halotolerans strain Q2H2     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1251440..1262096
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RYX39_RS06375 (RYX39_06375) oppF 1251899..1252816 (+) 918 WP_106020545.1 oligopeptide ABC transporter ATP-binding protein OppF -
  RYX39_RS06380 (RYX39_06380) - 1252926..1254143 (+) 1218 WP_127695468.1 MFS transporter -
  RYX39_RS06385 (RYX39_06385) - 1254309..1254887 (+) 579 WP_010333747.1 GNAT family N-acetyltransferase -
  RYX39_RS06390 (RYX39_06390) spx 1255067..1255462 (+) 396 WP_024120919.1 transcriptional regulator Spx -
  RYX39_RS06395 (RYX39_06395) - 1255505..1256161 (-) 657 WP_044156385.1 TerC family protein -
  RYX39_RS06400 (RYX39_06400) - 1256348..1256473 (+) 126 WP_120698858.1 hypothetical protein -
  RYX39_RS06405 (RYX39_06405) mecA 1256440..1257096 (+) 657 WP_127695466.1 adaptor protein MecA Regulator
  RYX39_RS06410 (RYX39_06410) coiA 1257254..1258405 (+) 1152 WP_106020543.1 competence protein CoiA family protein Machinery gene
  RYX39_RS06415 (RYX39_06415) pepF 1258635..1260464 (+) 1830 WP_167492246.1 oligoendopeptidase F -
  RYX39_RS06420 (RYX39_06420) - 1260500..1260667 (-) 168 WP_024120925.1 hypothetical protein -
  RYX39_RS06425 (RYX39_06425) spxH 1260981..1261880 (-) 900 WP_024120926.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25853.65 Da        Isoelectric Point: 4.0810

>NTDB_id=891017 RYX39_RS06405 WP_127695466.1 1256440..1257096(+) (mecA) [Bacillus halotolerans strain Q2H2]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEAASEDLDALLDDFQKEEQEVNQEEKEQKLQFVLRFDDFEDVISLSKLNVNGSKTTLYSFENR
YYLYVDFYNLTDEEVENQLSILLEYASESSISIHRLEEYGKLVVSEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=891017 RYX39_RS06405 WP_127695466.1 1256440..1257096(+) (mecA) [Bacillus halotolerans strain Q2H2]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTATGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTATTCTGGGAAGTTATGGATGAAGTTCATGAGGAAGAGGAAT
TCGCTGTTGAAGGTCCTCTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATTATCGTCACCAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAAGCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTTCAAAAAGAAGAGCAAGAAGTCAATCAGGAAGAAAAGGAGCAAAAGCTTCAATTTGTCTTGCGGTTTG
ATGACTTCGAAGATGTAATTTCTCTATCTAAATTAAACGTTAACGGAAGTAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTGGATTTTTACAATTTGACTGATGAAGAGGTTGAAAATCAGCTAAGTATCCTGTTGGAGTACGCGTC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAATACGGCAAGCTGGTTGTGTCAGAGCACGCTCTTGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

96.33

100

0.963