Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   RYX39_RS04740 Genome accession   NZ_CP136430
Coordinates   946209..947000 (+) Length   263 a.a.
NCBI ID   WP_106021586.1    Uniprot ID   -
Organism   Bacillus halotolerans strain Q2H2     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 941209..952000
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RYX39_RS04710 (RYX39_04710) - 942053..943084 (+) 1032 WP_024120642.1 iron chelate uptake ABC transporter family permease subunit -
  RYX39_RS04715 (RYX39_04715) - 943199..944077 (+) 879 WP_106021590.1 PhzF family phenazine biosynthesis isomerase -
  RYX39_RS04720 (RYX39_04720) - 944165..944749 (+) 585 WP_106021589.1 nitroreductase -
  RYX39_RS04725 (RYX39_04725) - 944788..944979 (-) 192 WP_106021588.1 YfhD family protein -
  RYX39_RS04730 (RYX39_04730) - 945045..945155 (-) 111 WP_010333447.1 YfhE family protein -
  RYX39_RS04735 (RYX39_04735) - 945209..946120 (-) 912 WP_106021587.1 TIGR01777 family oxidoreductase -
  RYX39_RS04740 (RYX39_04740) recX 946209..947000 (+) 792 WP_106021586.1 recombination regulator RecX Regulator
  RYX39_RS04745 (RYX39_04745) - 947007..947327 (+) 321 WP_106021585.1 YfhH family protein -
  RYX39_RS04750 (RYX39_04750) - 947464..948657 (+) 1194 WP_101860265.1 MFS transporter -
  RYX39_RS04755 (RYX39_04755) - 948690..948842 (-) 153 WP_010333452.1 small, acid-soluble spore protein K -
  RYX39_RS04760 (RYX39_04760) - 948967..949236 (+) 270 WP_024120650.1 YfhJ family protein -
  RYX39_RS04765 (RYX39_04765) - 949651..949863 (-) 213 WP_010333455.1 helix-turn-helix transcriptional regulator -
  RYX39_RS04770 (RYX39_04770) - 950056..950574 (+) 519 WP_095714801.1 SH3 domain-containing protein -
  RYX39_RS04775 (RYX39_04775) - 950660..950992 (+) 333 WP_127695650.1 SdpI family protein -
  RYX39_RS04780 (RYX39_04780) - 950979..951842 (+) 864 WP_101860263.1 alpha/beta fold hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30818.06 Da        Isoelectric Point: 6.3785

>NTDB_id=891005 RYX39_RS04740 WP_106021586.1 946209..947000(+) (recX) [Bacillus halotolerans strain Q2H2]
MPFITKISAQKKNTERFNIFLDEKYAFSVDADVLVKFELKKGKELDDLEIIEIQYGDEVKKGFNRAIDFLSYRMRSMKEV
EDHLKKKDTSAPVIAEVIHKLNDYNYLNDQEFAAAYVSTHKKTNGKGPDVLFRELKAKGIDDDTIKDTLSSFSFEEQTEK
AVKHIEKLLKKDKKLSSKEIKQRAQMQLQRKGFSFDVISAALEQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=891005 RYX39_RS04740 WP_106021586.1 946209..947000(+) (recX) [Bacillus halotolerans strain Q2H2]
ATGCCATTTATTACAAAGATTTCAGCGCAAAAAAAGAATACGGAACGCTTTAATATTTTTCTGGATGAAAAATATGCTTT
CAGTGTTGACGCAGATGTGCTCGTGAAATTTGAGCTTAAAAAGGGAAAAGAGCTTGATGACCTCGAGATCATTGAGATTC
AATACGGAGATGAAGTGAAAAAAGGCTTCAACCGTGCGATTGATTTTTTATCCTATCGAATGCGGTCAATGAAAGAGGTA
GAAGACCATTTAAAGAAAAAAGATACCTCGGCGCCCGTCATTGCGGAAGTGATTCATAAGCTGAACGATTACAACTATTT
AAATGACCAAGAGTTTGCGGCGGCCTATGTGAGCACCCACAAAAAAACAAACGGAAAAGGGCCTGACGTTTTGTTCAGAG
AGCTGAAAGCGAAGGGGATTGATGACGACACCATCAAAGATACGCTGAGTTCTTTCTCCTTTGAAGAACAGACGGAAAAA
GCAGTTAAGCATATCGAAAAGCTTCTGAAGAAAGACAAGAAACTCTCTTCAAAAGAAATCAAACAGCGAGCACAGATGCA
GCTGCAGCGCAAAGGCTTCTCATTTGATGTCATCTCTGCGGCGCTGGAGCAGATTGAATACGAAAATGATGAAGACACTG
AAAAAGAAGCGCTGCGTCTTCATGCGGAAAAAGCGTTTAGAAAATACCGTTATGACGGCTCCTATGAAAGTGCCATGAAG
GTCAAACAATTTTTATTCAGAAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCAGGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

91.635

100

0.916