Detailed information NTG0890964

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: WLF14_RS27435
• Genome accession: NZ_CP151816
• Coordinates: 6036208..6039042 (+)
• Length: 944 a.a.
• NCBI ID: WP_069077106.1
• Uniprot ID: -
• Organism: Pseudomonas fluorescens strain IMGN2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 6031208..6044042

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WLF14_RS27410 (WLF14_27410)	-	6031659..6032222 (+)	564	WP_024077670.1	cysteine hydrolase family protein	-
WLF14_RS27415 (WLF14_27415)	tam	6032246..6033007 (-)	762	WP_342308453.1	trans-aconitate 2-methyltransferase	-
WLF14_RS27420 (WLF14_27420)	-	6033125..6034033 (+)	909	WP_277378802.1	LysR family transcriptional regulator	-
WLF14_RS27425 (WLF14_27425)	ssb	6034110..6034625 (-)	516	WP_003232445.1	single-stranded DNA-binding protein	Machinery gene
WLF14_RS27430 (WLF14_27430)	-	6034635..6036029 (-)	1395	WP_024077673.1	MFS transporter	-
WLF14_RS27435 (WLF14_27435)	uvrA	6036208..6039042 (+)	2835	WP_069077106.1	excinuclease ABC subunit UvrA	Machinery gene
WLF14_RS27440 (WLF14_27440)	bfr	6039110..6039574 (-)	465	WP_015886133.1	bacterioferritin	-
WLF14_RS27445 (WLF14_27445)	-	6039730..6041178 (-)	1449	WP_024077675.1	catalase	-
WLF14_RS27450 (WLF14_27450)	rplQ	6041416..6041802 (-)	387	WP_007918448.1	50S ribosomal protein L17	-
WLF14_RS27455 (WLF14_27455)	rpoA	6041844..6042845 (-)	1002	WP_003176403.1	DNA-directed RNA polymerase subunit alpha	-
WLF14_RS27460 (WLF14_27460)	rpsD	6042868..6043488 (-)	621	WP_003176404.1	30S ribosomal protein S4	-
WLF14_RS27465 (WLF14_27465)	rpsK	6043507..6043896 (-)	390	WP_002555466.1	30S ribosomal protein S11	-

Sequence

Protein

• Length: 944 a.a.
• Molecular weight: 104194.27 Da
• Isoelectric Point: 7.3291

>NTDB_id=890964 WLF14_RS27435 WP_069077106.1 6036208..6039042(+) (uvrA) [Pseudomonas fluorescens strain IMGN2]
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSMMEKPDVDTIEGLS
PAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGIPRCPDHDIPLEAQTVSQMVDLVLAQPEGAKLMLLAPVIRERKG
EHLSVFEELRAQGFVRARINGKLYELDEAPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE
PGEEIIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDIKRLVNGELTLAEGAIRGWDRRNVYYFQML
GSLASHYKFSLEVPFNQLSAEQQKVILNGSGSQNVDFKYLNDRGDIVKRSHPFEGIVPNLERRYRETESASVREELAKFL
STQPCPDCRGTRLRREARHVWVGEKTLPAVTNLPIGDACEYFGALKLTGRRGEIADKILKEIRERLQFLVNVGLDYLSLD
RSADTLSGGEAQRIRLASQIGAGLVGVLYILDEPSIGLHQRDNDRLLGTLKHLRDIGNTVIVVEHDEDAIRLADYVVDIG
PGAGVHGGHIVAEGTPAEVMAHPDSLTGKYLSGRVKIEVPAKRTPRNKKMALHLKGARGNNLRNVDLEIPLGLLTCVTGV
SGSGKSTLINNTLFPLSATALNGATTLEAAAHDSIKGLEHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPES
RSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKYKGKSIHETLEMTIEEARVFFD
AVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLSRELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDH
GNTVVVIEHNLDVIKTADWLVDLGPEGGSKGGQIIAVGTPEQVSEMPQSHTGYYLKPLLARDRA

Nucleotide

• Length: 2835 bp

>NTDB_id=890964 WLF14_RS27435 WP_069077106.1 6036208..6039042(+) (uvrA) [Pseudomonas fluorescens strain IMGN2]
TTGGACAAGATCCTGATTCGTGGGGCTAGAACCCACAACCTGAAGAACATCGACCTGACCCTGCCCCGGGACAAATTGAT
CGTCATCACCGGCTTGTCCGGCTCCGGCAAATCTTCCCTGGCGTTCGACACGCTGTATGCCGAAGGTCAGCGTCGCTATG
TGGAATCGCTGTCGGCCTATGCCCGCCAGTTCCTGTCGATGATGGAAAAACCCGACGTCGACACCATTGAAGGCCTGTCG
CCGGCGATTTCCATCGAACAGAAGTCGACGTCCCACAACCCGCGCTCCACCGTGGGCACCATCACCGAAATCTACGACTA
CCTGCGCCTGCTGTACGCGCGAGTGGGCATTCCCCGTTGCCCGGACCACGACATTCCACTGGAAGCCCAGACCGTCAGCC
AGATGGTCGACCTGGTGCTGGCCCAACCGGAAGGCGCCAAGCTGATGCTGTTGGCGCCGGTGATTCGCGAACGCAAGGGT
GAACACCTTTCCGTATTCGAAGAGCTGCGTGCGCAGGGCTTTGTGCGCGCACGCATCAACGGCAAGCTCTACGAACTGGA
CGAAGCGCCGAAGCTCGACAAGCAGAAGAAGCACTCGATCGATGTGGTGGTCGACCGCTTCAAAGTGCGGGCCGACCTGC
AGCAGCGTCTGGCAGAATCGTTCGAGACTGCGTTGAAGCTGGCAGACGGTATAGCCCTGGTGGCGCCGATGGATGACGAG
CCGGGCGAAGAGATCATCTTCTCCGCGCGCTTTGCCTGCCCGATCTGTGGCCATGCCATCAGCGAGCTGGAACCCAAGCT
GTTCTCCTTCAACAACCCGGCCGGCGCCTGCCCGACCTGCGATGGCCTGGGCGTGAAGCAATTCTTCGACATCAAGCGCC
TGGTTAACGGGGAGCTGACATTGGCGGAGGGCGCGATACGCGGCTGGGACAGGCGTAACGTCTACTACTTCCAGATGCTG
GGGTCGCTGGCGTCCCACTACAAGTTCAGCCTTGAAGTGCCATTCAATCAACTGTCGGCAGAACAGCAGAAAGTCATCCT
CAATGGCAGTGGCTCGCAGAACGTCGATTTCAAATACCTGAACGACCGTGGCGATATCGTCAAGCGCTCCCACCCGTTCG
AAGGCATCGTGCCGAACCTGGAGCGGCGCTACCGCGAGACTGAATCGGCGAGCGTGCGCGAAGAACTGGCGAAGTTCCTC
AGCACTCAACCCTGCCCGGATTGCCGCGGCACTCGCCTGCGCCGTGAGGCGCGGCATGTGTGGGTTGGCGAGAAGACGCT
GCCGGCAGTCACCAACCTGCCAATCGGCGATGCATGCGAGTACTTCGGTGCACTCAAGCTGACCGGGCGCCGTGGGGAAA
TTGCCGACAAGATCCTCAAGGAAATCCGCGAGCGCCTGCAGTTCCTGGTCAACGTTGGCTTGGACTACCTGTCGCTGGAT
CGCAGCGCCGATACGCTGTCAGGCGGCGAAGCCCAGCGGATTCGCCTGGCCAGCCAGATTGGCGCCGGCCTGGTGGGTGT
GCTGTACATCCTCGATGAGCCGTCGATCGGTCTGCACCAGCGCGACAATGATCGTCTCCTGGGCACCTTGAAGCACCTTC
GGGATATCGGCAACACGGTGATTGTGGTCGAGCATGATGAAGACGCTATCCGCCTGGCGGACTACGTAGTCGATATCGGC
CCTGGGGCTGGCGTGCATGGCGGTCATATTGTCGCCGAGGGCACGCCCGCCGAAGTCATGGCTCACCCTGACTCGTTGAC
CGGCAAGTACCTGTCTGGCCGAGTGAAGATTGAAGTGCCAGCCAAGCGTACGCCACGTAACAAGAAGATGGCATTGCACC
TCAAGGGCGCGCGGGGCAACAACTTGCGCAATGTCGACCTGGAAATTCCCCTGGGCTTGCTGACGTGCGTAACCGGTGTT
TCCGGTTCAGGCAAATCCACGCTGATCAACAACACCCTGTTCCCACTGAGTGCCACCGCCCTGAACGGCGCGACCACCCT
GGAAGCGGCGGCACACGACAGCATCAAGGGCCTGGAGCACCTGGACAAAGTGGTCGATATCGACCAGAGCCCGATTGGCC
GCACACCACGCTCCAATCCGGCAACCTACACAGGGCTGTTCACGCCGATTCGCGAACTGTTCGCTGGCGTTCCGGAATCT
CGCTCGCGGGGCTACGGGCCTGGCCGGTTCTCGTTCAACGTCAAAGGCGGGCGCTGCGAAGCATGCCAGGGTGATGGCTT
GATCAAGGTGGAGATGCACTTCCTGCCAGACATCTATGTGCCGTGCGATGTGTGCAAGAGCAAGCGCTACAACCGCGAAA
CCCTGGAGATCAAGTACAAGGGCAAGAGCATCCACGAAACCCTGGAAATGACTATCGAGGAAGCGCGGGTGTTCTTCGAT
GCGGTCCCGGCGCTGGCGCGCAAGCTGCAAACGCTGATGGATGTGGGCTTGTCCTATATCAAACTTGGGCAGTCCGCGAC
CACTCTATCCGGTGGTGAAGCGCAACGGGTGAAGCTGTCTCGCGAGCTGTCCAAGCGCGATACCGGCAAGACCTTGTATA
TCCTGGATGAGCCAACTACCGGCCTGCATTTCGCGGATATTCAACAGTTGCTGGATGTCTTGCATCGCCTGCGCGACCAC
GGCAACACCGTGGTGGTGATCGAGCACAATCTGGATGTGATCAAGACGGCCGACTGGCTGGTTGACCTCGGCCCGGAAGG
CGGTTCCAAGGGTGGCCAGATCATTGCGGTGGGCACGCCGGAGCAGGTCTCCGAAATGCCACAGTCCCACACGGGTTACT
ATCTCAAGCCCTTGCTGGCGCGCGACCGGGCCTGA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-237)

• UvrA DNA-binding domain (UvrA_DNA-bind) (290-398)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.447	99.576	0.572
uvrA	Streptococcus pneumoniae TIGR4	57.447	99.576	0.572
uvrA	Streptococcus pneumoniae D39	57.447	99.576	0.572