Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   AAFV99_RS09325 Genome accession   NZ_CP151815
Coordinates   1820627..1821367 (+) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain PS006-42     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1815627..1826367
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAFV99_RS09300 (AAFV99_09300) yhaM 1816045..1816986 (+) 942 WP_001244171.1 3'-5' exoribonuclease YhaM -
  AAFV99_RS09305 (AAFV99_09305) - 1817107..1818069 (-) 963 WP_000782121.1 foldase protein PrsA -
  AAFV99_RS09310 (AAFV99_09310) - 1818274..1818831 (-) 558 WP_000477959.1 DUF3267 domain-containing protein -
  AAFV99_RS09315 (AAFV99_09315) - 1819564..1819929 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  AAFV99_RS09320 (AAFV99_09320) - 1820071..1820493 (-) 423 WP_000004988.1 HIT family protein -
  AAFV99_RS09325 (AAFV99_09325) pptA 1820627..1821367 (+) 741 WP_000216874.1 ABC transporter ATP-binding protein Regulator
  AAFV99_RS09330 (AAFV99_09330) - 1821360..1822583 (+) 1224 WP_000551840.1 ABC transporter permease -
  AAFV99_RS09335 (AAFV99_09335) traP 1822707..1823210 (-) 504 WP_000737978.1 signal transduction protein TRAP -
  AAFV99_RS09340 (AAFV99_09340) - 1823373..1823483 (+) 111 WP_001790154.1 hypothetical protein -
  AAFV99_RS09345 (AAFV99_09345) hemE 1823473..1824510 (+) 1038 WP_069994773.1 uroporphyrinogen decarboxylase -
  AAFV99_RS09350 (AAFV99_09350) hemH 1824568..1825491 (+) 924 WP_000162881.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=890838 AAFV99_RS09325 WP_000216874.1 1820627..1821367(+) (pptA) [Staphylococcus aureus strain PS006-42]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=890838 AAFV99_RS09325 WP_000216874.1 1820627..1821367(+) (pptA) [Staphylococcus aureus strain PS006-42]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTACTGTGATCGTTTTATCATACTTGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545