Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   OCU74_RS10810 Genome accession   NZ_AP024883
Coordinates   2422183..2423583 (-) Length   466 a.a.
NCBI ID   WP_087479736.1    Uniprot ID   -
Organism   Vibrio mangrovi strain CECT 7927     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 2417183..2428583
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OCU74_RS10775 moaE 2417729..2418181 (-) 453 WP_087479729.1 molybdopterin synthase catalytic subunit MoaE -
  OCU74_RS10780 moaD 2418185..2418430 (-) 246 WP_087479730.1 molybdopterin synthase sulfur carrier subunit -
  OCU74_RS10785 moaC 2418427..2418906 (-) 480 WP_087479731.1 cyclic pyranopterin monophosphate synthase MoaC -
  OCU74_RS10790 moaB 2418922..2419428 (-) 507 WP_087479732.1 molybdenum cofactor biosynthesis protein B -
  OCU74_RS10795 moaA 2419489..2420472 (-) 984 WP_087479733.1 GTP 3',8-cyclase MoaA -
  OCU74_RS10800 yvcK 2420777..2421703 (+) 927 WP_087479734.1 uridine diphosphate-N-acetylglucosamine-binding protein YvcK -
  OCU74_RS10805 luxU 2421830..2422180 (-) 351 WP_087479735.1 quorum-sensing phosphorelay protein LuxU -
  OCU74_RS10810 luxO 2422183..2423583 (-) 1401 WP_087479736.1 quorum-sensing sigma-54 dependent transcriptional regulator LuxO Regulator
  OCU74_RS10815 uvrB 2423843..2425873 (-) 2031 WP_087479737.1 excinuclease ABC subunit UvrB -
  OCU74_RS10825 - 2426620..2427501 (-) 882 WP_087479738.1 LysR family transcriptional regulator -
  OCU74_RS10830 budA 2427598..2428383 (+) 786 WP_087479739.1 acetolactate decarboxylase -

Sequence

Protein


Download         Length: 466 a.a.        Molecular weight: 52462.22 Da        Isoelectric Point: 5.3139

>NTDB_id=89082 OCU74_RS10810 WP_087479736.1 2422183..2423583(-) (luxO) [Vibrio mangrovi strain CECT 7927]
MQSEQLPQKSRYLLMVEDTASVAVLYRSYLKPLDIDINIVGTGKEALDSLEKREPDLILLDLRLPDMTGMDVLHEVKRKY
PDVPVIFMTAHGSIDTAVEAMRYGAQDFLIKPCEADRLRVTVNNAIRKASKIKSESDDPRSQNYQGFIGSSQTMQAVYRT
IDSAAASKASIFITGESGTGKEVCAEAVHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATDRQGAAELADG
GTLFLDELCEMDLDLQAKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRE
RGDDVIEIAYSLLGYMSKEEEKDFVRLAAEVVERFRQYEWPGNVRQLQNVLRNVVVLNQGKEITLDMLPPPLNKPKENYL
RLVQPMMEEKKPSIHEIFPLWMTEKMAIENAIDACEGNIPKAAGYLEVSPSTIYRKLQSWNAEEKA

Nucleotide


Download         Length: 1401 bp        

>NTDB_id=89082 OCU74_RS10810 WP_087479736.1 2422183..2423583(-) (luxO) [Vibrio mangrovi strain CECT 7927]
ATGCAATCTGAACAGTTACCGCAAAAAAGCAGATATCTGCTGATGGTTGAAGATACGGCTTCTGTTGCCGTGTTGTATCG
TTCTTATCTGAAACCTCTGGATATTGACATCAATATTGTCGGTACGGGAAAAGAGGCGTTGGATAGTCTTGAAAAACGAG
AGCCTGATCTAATCCTGCTTGATTTGCGTCTTCCTGATATGACAGGGATGGATGTTTTACATGAAGTAAAACGGAAATAC
CCTGATGTCCCGGTTATTTTTATGACGGCCCATGGTTCAATTGATACAGCCGTTGAAGCCATGCGTTATGGTGCCCAGGA
CTTTTTAATTAAGCCGTGTGAAGCGGATAGATTACGTGTCACGGTGAACAATGCAATTCGGAAAGCTTCGAAAATTAAGA
GTGAGTCCGATGATCCACGCAGTCAGAATTATCAGGGTTTTATTGGTAGTAGCCAAACTATGCAGGCTGTCTACCGGACT
ATTGACTCTGCTGCAGCCAGTAAAGCCAGTATTTTTATCACTGGAGAAAGTGGGACCGGGAAAGAAGTCTGTGCTGAAGC
CGTACATGCTGCCAGTAAGCGGGGTGATAAACCTTTTATTGCAATTAACTGCGCTGCGATTCCCAAAGATTTGATTGAGA
GTGAACTGTTTGGGCACGTAAAAGGTGCTTTCACCGGTGCAGCAACTGATCGTCAGGGTGCTGCTGAGCTGGCTGATGGC
GGTACGTTATTTCTGGATGAGCTCTGTGAAATGGATTTAGATCTGCAGGCAAAACTGCTGAGATTTATTCAGACCGGTAC
ATTCCAGAAAGTTGGTTCATCGAAAATGAAAAGTGTCGATGTCCGCTTTGTATGTGCAACGAACCGGGATCCTTGGAAAG
AAGTTCAGGAAGGTCGCTTTCGGGAAGATTTGTACTATCGTTTATATGTCATTCCTCTTCATCTGCCGCCACTTCGTGAA
CGTGGCGATGATGTGATCGAAATCGCTTACTCTTTATTGGGCTATATGTCCAAAGAAGAAGAGAAGGATTTTGTCCGTCT
TGCTGCTGAAGTTGTTGAGCGCTTCAGACAGTACGAATGGCCGGGGAATGTACGTCAGCTCCAGAATGTTTTGCGAAATG
TTGTGGTGTTGAACCAAGGGAAAGAGATCACTCTGGATATGTTACCGCCGCCGCTGAATAAACCGAAAGAGAATTATTTA
CGTTTGGTGCAGCCAATGATGGAAGAGAAGAAACCTTCTATTCATGAAATATTTCCTTTATGGATGACAGAAAAAATGGC
GATAGAAAATGCGATTGATGCATGTGAAGGAAATATCCCGAAAGCTGCAGGCTATCTAGAGGTTAGTCCTTCGACTATTT
ACCGTAAACTACAATCATGGAATGCAGAAGAGAAAGCATAA

Domains

Predicted by InterproScan.

Bacterial regulatory protein, Fis family (HTH_8)

(420-458)

Response regulator receiver domain (Response_reg)

(14-122)

Sigma-54 interaction domain (Sigma54_activat)

(148-313)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

86.801

95.923

0.833

Multiple sequence alignment