Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   AAFV99_RS04810 Genome accession   NZ_CP151815
Coordinates   937482..938282 (-) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain PS006-42     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 932482..943282
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAFV99_RS04790 (AAFV99_04790) - 932791..933063 (-) 273 WP_248289860.1 hypothetical protein -
  AAFV99_RS04795 (AAFV99_04795) - 933056..933991 (-) 936 WP_000251225.1 dsDNA nuclease domain-containing protein -
  AAFV99_RS04800 (AAFV99_04800) rlmH 934090..934569 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  AAFV99_RS04805 (AAFV99_04805) adsA 934937..937255 (-) 2319 WP_000645769.1 LPXTG-anchored adenosine synthase AdsA -
  AAFV99_RS04810 (AAFV99_04810) vicX 937482..938282 (-) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  AAFV99_RS04815 (AAFV99_04815) - 938678..939466 (-) 789 WP_001104166.1 two-component system regulatory protein YycI -
  AAFV99_RS04820 (AAFV99_04820) yycH 939467..940801 (-) 1335 WP_001060140.1 two-component system activity regulator YycH -
  AAFV99_RS04825 (AAFV99_04825) walK 940794..942620 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=890818 AAFV99_RS04810 WP_000088649.1 937482..938282(-) (vicX) [Staphylococcus aureus strain PS006-42]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=890818 AAFV99_RS04810 WP_000088649.1 937482..938282(-) (vicX) [Staphylococcus aureus strain PS006-42]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGTGATATGGGACATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474