Detailed information NTG0890675

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: RX583_RS06260
• Genome accession: NZ_CP136402
• Coordinates: 1208031..1208984 (+)
• Length: 317 a.a.
• NCBI ID: WP_003245494.1
• Uniprot ID: A0AAE2SG99
• Organism: Bacillus subtilis subsp. subtilis str. 168
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1203031..1213984

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RX583_RS06235 (RX583_06235)	argF	1204863..1205822 (+)	960	WP_003232980.1	ornithine carbamoyltransferase	-
RX583_RS06240 (RX583_06240)	yjzC	1205908..1206087 (+)	180	WP_003245356.1	YjzC family protein	-
RX583_RS06245 (RX583_06245)	yjzD	1206133..1206318 (-)	186	WP_003245236.1	YjzD family protein	-
RX583_RS06250 (RX583_06250)	-	1206567..1207301 (+)	735	WP_003245223.1	hypothetical protein	-
RX583_RS06255 (RX583_06255)	-	1207383..1207940 (+)	558	WP_003232974.1	hypothetical protein	-
RX583_RS06260 (RX583_06260)	med	1208031..1208984 (+)	954	WP_003245494.1	transcriptional regulator Med	Regulator
RX583_RS06265 (RX583_06265)	comZ	1208999..1209190 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
RX583_RS06270 (RX583_06270)	yjzB	1209220..1209459 (-)	240	WP_003232972.1	spore coat protein YjzB	-
RX583_RS06275 (RX583_06275)	fabH	1209624..1210562 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
RX583_RS06280 (RX583_06280)	fabF	1210585..1211826 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
RX583_RS06285 (RX583_06285)	yjaZ	1211902..1212687 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
RX583_RS06290 (RX583_06290)	appD	1212879..1213865 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.80 Da
• Isoelectric Point: 4.5457

>NTDB_id=890675 RX583_RS06260 WP_003245494.1 1208031..1208984(+) (med) [Bacillus subtilis subsp. subtilis str. 168]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=890675 RX583_RS06260 WP_003245494.1 1208031..1208984(+) (med) [Bacillus subtilis subsp. subtilis str. 168]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	100	100	1