Detailed information NTG0089046

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: Pcarn_RS11055
• Genome accession: NZ_AP024881
• Coordinates: 2419310..2422690 (+)
• Length: 1126 a.a.
• NCBI ID: WP_261833927.1
• Uniprot ID: -
• Organism: Vibrio ishigakensis strain C1
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2414310..2427690

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Pcarn_RS11035	erpA	2415105..2415446 (-)	342	WP_261833923.1	iron-sulfur cluster insertion protein ErpA	-
Pcarn_RS11040	hemL	2415607..2416890 (+)	1284	WP_261833924.1	glutamate-1-semialdehyde 2,1-aminomutase	-
Pcarn_RS11045	-	2416993..2418078 (+)	1086	WP_261833925.1	AI-2E family transporter	-
Pcarn_RS11050	rsmC	2418094..2419113 (+)	1020	WP_261833926.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
Pcarn_RS11055	chiS	2419310..2422690 (+)	3381	WP_261833927.1	ATP-binding protein	Regulator
Pcarn_RS11060	-	2423266..2424939 (+)	1674	WP_261833928.1	ABC transporter substrate-binding protein	-
Pcarn_RS11065	-	2425062..2426048 (+)	987	WP_261833929.1	ABC transporter permease	-
Pcarn_RS11070	-	2426051..2427079 (+)	1029	WP_261833930.1	ABC transporter permease	-

Sequence

Protein

• Length: 1126 a.a.
• Molecular weight: 127438.32 Da
• Isoelectric Point: 4.6844

>NTDB_id=89046 Pcarn_RS11055 WP_261833927.1 2419310..2422690(+) (chiS) [Vibrio ishigakensis strain C1]
MSQNSTAPKFKRIKSNLMAIFLVISLTPMLVVGYFFLRSHSLDLTEQSTQYLIAARNGASQKVSTYFNNLDAEVVGFVHS
ELAYSSGGRFYGLIDAFRRLGENVEESREIGQKRYIPGSGDVISQPTTRESANYVGVERYRLIHARYQNTFLDLLKRSDF
DDILLVDLDGNVAYSALKNDYYATNLDSGRYHNSELGKLFESLKSTMSNKQKDLLDYNDLVLMSDFSQNTGKDIDQKVVW
FAAPIIQQGYLHSYAFARLPIERLSNLIDSDPTDNVSIMLLDQHQNLLAGSPDQLEEVIALTQTEPQADLTQYVDNDNET
IMASFAPVSVHGMQWSVFSQSPEDLAFARVSNLQMLFVGIVVVALVLVFITSAYLSNLITRPLLKLTWAAERISAGHLEE
KVEGAEREDEIGRLAVSFERMQRSVREKIELIEKQKQELEYNLQTIAEQNQELQLADKLKDEFLATTSHELRTPLHGMIG
VAQTLLSGAHGDIPSAQRFQLEIIINSGNRLSNLVDDLLDYHKMRYGDLKLDQHAVSVASSAQLVVELSNHLIEDKPVRL
LNHIDPRLPMVSADPQRLEQVLYNLVGNAIKFTNEGKVVLNATEQDDSLVIEVIDTGRGIPEQDLETIFEPLMQSQSARY
QHGTGLGLSISKRLIELMDGELSVSSQPLLGTTFRLTLPLATEEQLNQQVEGTHFKAETTEQIKLSEEPSALPENPDGEL
ILIADDEPVNLKILESFLRIEGYRVECASDGQQALDKVAEQKPAVLLLDIMMPELSGYEVCEKLRTKYSRHELPIIMLTA
LNQTEDKIKGFECGANDYLVKPFNKQELSARIGVHIDASVSEERKQQNLVLTQELSQLEQTEAILLDTQTRLLEQLENTP
EAIVCVNDKHKISYANQTATQLFKRSIEQLKRSSIEEFIGPKYLSFDQPHRSIDIDIFVDEEKQSVPSDIFTLPLETGMR
GMFIFNNDPHKVNQRVADLEVALDAMSHYAFAGDKSQLDLIRELGGDFSKLVEKVEGEKNGKQQTLRQLLVECMTLAIEY
WESHEGQTKFTFAEQSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLNSLDFILTHSDRDDAQRAQLLSLRDQLQ
YQVTQN

Nucleotide

• Length: 3381 bp

>NTDB_id=89046 Pcarn_RS11055 WP_261833927.1 2419310..2422690(+) (chiS) [Vibrio ishigakensis strain C1]
ATGTCTCAAAATTCCACTGCGCCAAAATTTAAACGTATCAAAAGTAACCTGATGGCCATCTTCTTGGTGATCAGCCTTAC
CCCTATGTTGGTGGTTGGATACTTCTTCCTTCGCTCCCACAGCTTAGATCTCACAGAGCAGAGCACGCAGTATCTAATCG
CTGCGCGAAATGGAGCGAGTCAGAAGGTATCCACCTACTTCAATAACCTTGATGCGGAAGTGGTAGGCTTTGTTCATTCT
GAGCTTGCTTACTCCAGTGGTGGCCGCTTCTACGGGTTGATCGATGCCTTTCGTCGCCTCGGAGAGAATGTAGAGGAATC
TCGTGAGATAGGACAAAAGCGCTATATTCCAGGCTCGGGAGATGTGATTAGTCAGCCGACAACTCGAGAATCGGCGAACT
ATGTGGGGGTTGAGCGCTACCGCCTGATCCATGCTCGCTACCAGAACACCTTCCTAGACCTTCTAAAGCGTTCGGACTTT
GATGACATCCTACTGGTGGATCTAGATGGCAACGTTGCCTATTCAGCCCTTAAGAACGACTATTATGCCACCAACCTAGA
CTCAGGGCGCTATCACAACAGCGAACTGGGAAAGCTGTTTGAGTCGTTAAAGAGCACTATGTCGAACAAGCAGAAAGACC
TGTTGGACTATAACGACTTGGTATTGATGAGTGACTTTAGCCAGAACACAGGCAAAGACATTGATCAGAAGGTAGTGTGG
TTTGCCGCGCCTATTATCCAGCAAGGCTACCTGCACAGCTACGCCTTTGCCCGCCTTCCAATAGAACGACTAAGCAATCT
TATCGACAGCGATCCAACTGACAATGTCAGCATCATGCTATTGGATCAGCATCAAAACCTGCTTGCTGGTAGTCCAGATC
AGTTAGAAGAGGTCATCGCACTCACTCAAACTGAGCCTCAGGCAGATCTTACTCAGTACGTGGATAACGACAATGAAACG
ATCATGGCTTCATTCGCACCTGTCTCAGTGCACGGTATGCAGTGGTCGGTATTCTCTCAATCACCTGAAGACCTCGCCTT
CGCGCGCGTTTCCAACCTACAGATGCTGTTTGTGGGTATCGTAGTGGTGGCACTGGTGTTGGTGTTTATCACCTCGGCCT
ATCTATCGAACCTGATCACCCGTCCACTGCTTAAATTAACCTGGGCAGCTGAACGCATCTCAGCCGGTCACCTAGAAGAG
AAAGTAGAGGGAGCTGAGCGCGAGGACGAGATTGGTCGACTGGCTGTCAGCTTTGAGCGTATGCAGCGCTCGGTCCGTGA
GAAAATCGAACTAATTGAAAAACAAAAGCAAGAGTTAGAGTACAACCTTCAGACCATTGCCGAACAAAACCAAGAACTGC
AACTGGCAGATAAACTAAAAGATGAATTCCTAGCCACCACCTCACACGAACTTCGGACCCCACTGCACGGTATGATAGGC
GTGGCTCAAACGCTTCTCTCTGGTGCACATGGAGATATCCCGAGTGCGCAGAGATTCCAGTTAGAGATCATCATCAACAG
TGGTAACCGGCTTTCTAATCTAGTGGATGATCTGCTGGACTATCACAAGATGCGCTATGGGGATCTCAAGCTGGATCAAC
ACGCAGTATCGGTCGCTTCATCGGCACAACTGGTGGTCGAACTCTCTAACCACCTTATCGAAGATAAACCTGTGCGCCTT
CTAAACCATATCGACCCTCGCCTACCTATGGTGAGCGCTGACCCGCAACGCTTAGAGCAGGTGCTGTATAACCTTGTCGG
GAACGCCATCAAGTTCACTAACGAAGGTAAAGTGGTGCTAAATGCTACCGAGCAAGACGACAGCTTAGTAATAGAGGTCA
TCGATACTGGTCGCGGCATTCCAGAACAAGACCTTGAAACCATCTTTGAACCCCTGATGCAGAGTCAATCTGCGCGCTAT
CAACACGGCACAGGTCTTGGGCTTTCCATCAGCAAGCGTCTTATTGAACTCATGGATGGTGAACTTAGCGTTAGCAGTCA
GCCTCTGCTGGGCACTACCTTCAGGCTAACTCTGCCCCTAGCGACAGAAGAGCAGCTCAACCAGCAGGTAGAGGGTACCC
ACTTTAAAGCCGAAACCACCGAGCAAATAAAGCTATCAGAAGAGCCAAGCGCTCTGCCAGAGAACCCAGATGGTGAACTG
ATCCTGATTGCCGATGATGAGCCGGTAAACCTGAAAATCCTAGAGAGTTTCCTTCGAATCGAGGGCTATCGGGTTGAATG
TGCTAGCGACGGACAGCAAGCCCTAGATAAAGTGGCAGAGCAAAAACCGGCTGTGCTTCTATTGGATATTATGATGCCAG
AGCTCAGCGGTTATGAGGTGTGTGAAAAGCTCCGCACTAAGTACTCTCGACATGAACTTCCAATCATTATGCTCACCGCC
CTTAACCAGACCGAGGATAAGATCAAAGGTTTCGAGTGTGGTGCCAACGACTATCTAGTGAAGCCGTTTAATAAGCAGGA
GCTATCAGCGCGTATCGGTGTACACATCGATGCCAGTGTTTCTGAAGAGAGGAAACAGCAGAACCTAGTCCTCACCCAAG
AGTTGTCACAACTAGAACAGACCGAGGCGATCCTTCTAGATACTCAAACCAGACTGCTTGAGCAGCTGGAGAATACCCCT
GAGGCAATTGTCTGTGTCAACGATAAGCATAAGATCAGCTATGCCAACCAAACTGCTACTCAGCTGTTTAAACGCTCTAT
AGAGCAGCTCAAGCGCTCTAGCATAGAAGAGTTTATTGGACCGAAATATCTCAGCTTCGATCAGCCACACCGCAGTATCG
ATATCGATATCTTTGTGGATGAAGAGAAGCAGAGCGTGCCGAGTGATATCTTCACTTTGCCTTTAGAGACTGGTATGCGT
GGCATGTTTATCTTTAACAATGACCCACACAAGGTTAATCAGCGCGTCGCAGATCTAGAGGTTGCTCTAGATGCTATGTC
GCATTACGCCTTTGCCGGTGACAAGTCACAGCTCGACTTGATACGCGAGCTTGGCGGCGACTTCTCTAAGCTGGTAGAAA
AGGTTGAGGGAGAGAAGAACGGTAAACAGCAAACCCTAAGGCAGCTGCTGGTTGAATGTATGACCTTAGCCATAGAGTAT
TGGGAAAGCCACGAAGGGCAGACCAAGTTTACCTTTGCTGAGCAGAGTGGTTTATGGCGCGTCTACCTCGACAGAAGCAC
CTTACAGACCCGCACCCTAGACAAGTACCTAAGGGTTGAAACCCTGCCTAAAACGCCGCGCTGGCGCACCGTACTTAACT
CGTTGGATTTCATCCTAACCCACTCAGACAGAGACGATGCACAGCGTGCACAGTTGCTTTCACTGCGTGACCAACTCCAA
TACCAGGTCACGCAGAATTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (721-832)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• PAS fold (PAS) (874-922)

• HAMP domain (HAMP) (375-426)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-681)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	54.796	100	0.548