Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   RVY74_RS06045 Genome accession   NZ_CP136372
Coordinates   1186655..1187338 (+) Length   227 a.a.
NCBI ID   WP_002030378.1    Uniprot ID   A0A0A0WR99
Organism   Bacillus mycoides strain PAMC 29434     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1181655..1192338
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RVY74_RS06025 (RVY74_06025) - 1182638..1184284 (+) 1647 WP_002125935.1 peptide ABC transporter substrate-binding protein -
  RVY74_RS06030 (RVY74_06030) - 1184314..1184517 (-) 204 WP_000559981.1 hypothetical protein -
  RVY74_RS06035 (RVY74_06035) spx 1185098..1185493 (+) 396 WP_002011348.1 transcriptional regulator Spx -
  RVY74_RS06040 (RVY74_06040) - 1185544..1186218 (-) 675 WP_002030376.1 TerC family protein -
  RVY74_RS06045 (RVY74_06045) mecA 1186655..1187338 (+) 684 WP_002030378.1 adaptor protein MecA Regulator
  RVY74_RS06050 (RVY74_06050) - 1187411..1188955 (+) 1545 WP_002064255.1 cardiolipin synthase -
  RVY74_RS06055 (RVY74_06055) - 1189047..1190282 (+) 1236 WP_316281910.1 competence protein CoiA family protein -
  RVY74_RS06060 (RVY74_06060) pepF 1190333..1192159 (+) 1827 WP_002134970.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27043.20 Da        Isoelectric Point: 4.0116

>NTDB_id=890393 RVY74_RS06045 WP_002030378.1 1186655..1187338(+) (mecA) [Bacillus mycoides strain PAMC 29434]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQIGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELH
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQVVKERALETIRNNFPPKM

Nucleotide


Download         Length: 684 bp        

>NTDB_id=890393 RVY74_RS06045 WP_002030378.1 1186655..1187338(+) (mecA) [Bacillus mycoides strain PAMC 29434]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGGTTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGATT
TCTTTATCGATGGGCCGTTATGGATCCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCGGAGCTT
TCAAAGGATGGACAAAAGCTGGAACTACCAATAGGTGTAGACAAAATTATAGACATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAATAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTTATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAATTACAT
TCATTTGAGGACCGATATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGTATTTTAAG
TATTGTTTTAGAATATGGAGAAGAATCTACTTTAACGATTCACCGTGTAAGTGAGTATGGGAAACAGGTTGTGAAAGAGC
GTGCGCTTGAGACAATTCGCAACAATTTCCCTCCTAAAATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0A0WR99

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

54.386

100

0.546