Detailed information NTG0089015

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: OCU48_RS02590
• Genome accession: NZ_AP024878
• Coordinates: 545550..548948 (-)
• Length: 1132 a.a.
• NCBI ID: WP_141347161.1
• Uniprot ID: A0A4Y3I0J0
• Organism: Vibrio inusitatus strain LMG 23434
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 540550..553948

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU48_RS02575	-	541112..542140 (-)	1029	WP_141347158.1	ABC transporter permease	-
OCU48_RS02580	-	542142..543128 (-)	987	WP_141347159.1	ABC transporter permease	-
OCU48_RS02585	-	543279..544952 (-)	1674	WP_141347160.1	ABC transporter substrate-binding protein	-
OCU48_RS02590	chiS	545550..548948 (-)	3399	WP_141347161.1	response regulator	Regulator
OCU48_RS02595	rsmC	549056..550075 (-)	1020	WP_141347162.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
OCU48_RS02600	-	550089..551174 (-)	1086	WP_141347163.1	AI-2E family transporter	-
OCU48_RS02605	hemL	551290..552576 (-)	1287	WP_141347164.1	glutamate-1-semialdehyde 2,1-aminomutase	-
OCU48_RS02610	erpA	552774..553115 (+)	342	WP_017028370.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1132 a.a.
• Molecular weight: 127844.73 Da
• Isoelectric Point: 4.9790

>NTDB_id=89015 OCU48_RS02590 WP_141347161.1 545550..548948(-) (chiS) [Vibrio inusitatus strain LMG 23434]
MSKSHARPKFKRLQSTLMGAFMLVSLIPMLLVAFFFLRSHTQDLQEQSTTYLTSMRDGNTNKVTAYIGNLDSEVIGFVHS
ELAYASGGRFYGLIDSFRRLGEDLGESRSIGQQRYIPGSGNAIRTKTIKSDDNYANVERYRLLHKRYHSTFQSLVERSDF
DDIALVDLEGNVSYSIQKYDYYATNLDSGRYKKTELGELFKQLKDYVASNKDSLEQYNDIVLMSDFSINGNSGNSEEVAW
FAAPIVQRGYLHSYAFFRLPLSALTGLITEEHLVNLNVSLFDKSLKLLASNSNDVDPKQSSPVAIKALEGFAEVKTYTNL
SGDNTIAAYTPIDVHGLTWAVVVETPEEVAFERVNQLFKLFFIIVLSAAIIVVIASHYLSNFITTPLLKLTWAAERISAG
DLKENVEGTKRKDEIGRLAVSFERMQRSIREKIELIKEQNKELEFNLDTIATQNGELQLADKLKDEFLATTSHELRTPLH
GMIGVAQAILSEAHGSVPPSQRYQLEIIINSGHRLSNLVDDLLDYHKMQYGHLQLEPTAVSLSSASQLVVELSKHLVDKK
PVRIINQIDSSLPMVSADPQRLEQVLYNLVGNAIKFTSEGKVILNAEQQGEHLKIQVIDTGHGIPKEDLNNIFEPLTQSN
ASGYHQGTGLGLSISKRLIEIMRGELTVTSQPMLGTTFTMILPLASKQELDTFNSESETEHYSREEFHQTELDEQSLSLP
SNPDGKLVMIADDEPVNLKILESFLRVEGYRVVSAHNGREVLDLIAEEKPDILLLDIMMPELSGFQVCEYLRNLYNYNEL
PIIMLTALNQVEDKVKGFDCGANDYLVKPFNKQELSARIQVHINASLSEKRRQENDSLSAELSQREKVESLLLETQTKLL
EQLESTPEAIVCINENHKITFANKSATELLKRSIEQVKRSQIEEFIAPKHLQFDQPHRSIDIDIFVGETKQVIASDIFTL
PLETGLRGMIIFNSDPDDANQRINNLEVALDALASYAFSGDKSQLEELKEMGDEFADLVGQLDNSKDSKQQNMRQLLVDC
MSSALEYWENHDGNTKFNFAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLNSLDFILAHSDHDDAQRAQVV
GLRDQLQNLVTQ

Nucleotide

• Length: 3399 bp

>NTDB_id=89015 OCU48_RS02590 WP_141347161.1 545550..548948(-) (chiS) [Vibrio inusitatus strain LMG 23434]
ATGTCAAAAAGTCACGCTCGCCCAAAGTTTAAACGTCTACAAAGCACCCTGATGGGCGCCTTTATGCTAGTCAGTCTTAT
CCCGATGCTGCTGGTCGCTTTTTTCTTTCTTCGATCTCACACTCAAGATCTTCAAGAACAAAGCACCACCTATCTAACTT
CAATGAGAGATGGTAATACTAATAAGGTTACCGCTTATATTGGAAATCTTGACTCTGAGGTTATTGGCTTTGTTCATTCG
GAATTGGCTTACGCCAGTGGCGGACGTTTTTATGGGCTGATTGACTCTTTCAGACGCTTAGGGGAAGACCTCGGCGAATC
AAGAAGTATCGGTCAACAGAGATACATCCCCGGCTCTGGGAATGCGATCCGCACAAAAACTATCAAAAGCGACGACAACT
ACGCCAATGTTGAGCGGTACCGATTGCTGCACAAGCGCTATCATTCGACCTTTCAAAGCTTGGTAGAGCGTTCAGACTTC
GACGATATCGCACTAGTTGATCTTGAAGGTAACGTCTCCTACTCAATCCAAAAGTACGATTACTATGCAACGAACCTTGA
TTCAGGACGCTACAAGAAAACTGAACTGGGCGAACTGTTTAAACAACTTAAAGACTATGTCGCCTCAAATAAAGACTCCT
TGGAACAATATAATGACATTGTTCTTATGAGCGATTTCTCTATTAATGGTAATTCTGGTAACTCAGAGGAAGTAGCATGG
TTTGCAGCTCCAATTGTGCAAAGGGGCTACTTACATAGCTACGCGTTTTTCCGACTCCCGCTATCGGCACTCACAGGCCT
CATTACTGAAGAGCACCTCGTCAACCTGAACGTATCCTTGTTCGATAAATCCTTAAAGTTATTGGCAAGCAATAGCAACG
ATGTTGACCCAAAGCAAAGTTCACCAGTAGCCATAAAAGCCCTTGAAGGCTTTGCTGAAGTCAAGACGTACACAAACTTA
TCTGGCGATAATACCATCGCTGCCTATACACCTATTGATGTGCATGGTCTCACATGGGCCGTGGTCGTTGAAACTCCAGA
AGAAGTCGCATTTGAACGAGTCAACCAACTATTTAAGCTGTTTTTCATCATTGTATTAAGTGCAGCCATTATCGTAGTGA
TAGCCTCCCACTACCTGTCTAACTTCATTACTACCCCATTACTCAAGCTTACATGGGCTGCCGAGCGGATCTCTGCCGGC
GATCTTAAAGAAAATGTCGAAGGTACTAAGCGAAAAGATGAAATAGGCCGACTTGCGGTCAGCTTTGAAAGAATGCAGCG
TTCAATTCGAGAAAAAATTGAGTTAATCAAAGAGCAAAACAAAGAACTTGAGTTCAACCTCGATACTATCGCCACACAAA
ACGGTGAGCTTCAACTTGCGGATAAGCTGAAAGATGAGTTTTTGGCTACCACGTCTCATGAACTAAGAACACCGCTACAC
GGTATGATTGGAGTCGCGCAAGCTATACTCAGCGAAGCTCATGGAAGCGTACCTCCATCCCAAAGATACCAACTAGAGAT
TATCATCAATAGCGGGCACAGATTGTCTAACTTGGTGGATGACCTATTGGATTACCACAAGATGCAGTATGGTCATTTAC
AGCTTGAACCTACCGCGGTTTCACTCTCGTCTGCATCTCAGTTGGTTGTCGAGTTATCAAAGCACCTCGTCGATAAGAAG
CCCGTTCGCATCATCAACCAAATTGACAGTAGCTTGCCTATGGTCAGTGCCGATCCACAGAGGCTTGAGCAGGTGCTGTA
CAACCTTGTTGGTAACGCGATTAAATTCACTTCGGAAGGTAAAGTGATCTTAAATGCAGAGCAACAAGGTGAACACCTAA
AAATACAAGTAATTGATACCGGACACGGCATACCCAAAGAAGACCTCAATAATATCTTTGAACCACTTACTCAAAGTAAC
GCTTCTGGCTACCATCAAGGTACTGGTCTTGGACTATCTATCAGTAAGCGTTTGATTGAAATCATGCGCGGTGAATTGAC
TGTTACTAGCCAACCCATGCTCGGCACGACCTTTACTATGATTCTGCCACTCGCAAGTAAGCAAGAACTTGATACCTTCA
ATAGCGAGTCAGAAACTGAGCATTACTCTCGAGAGGAATTTCATCAAACAGAGCTTGATGAGCAGTCTCTATCTCTGCCA
AGCAATCCAGATGGCAAGCTAGTCATGATTGCGGATGATGAACCAGTCAACCTCAAGATACTAGAAAGTTTCTTGCGAGT
AGAAGGATATAGAGTAGTAAGTGCGCACAATGGCCGTGAAGTGCTTGATCTCATTGCCGAGGAGAAACCCGACATTCTGC
TATTAGATATCATGATGCCGGAGCTGAGTGGGTTCCAAGTTTGCGAGTATTTACGTAATCTTTACAACTACAACGAACTG
CCTATCATCATGCTCACAGCACTGAATCAGGTAGAGGACAAAGTGAAAGGCTTTGACTGTGGCGCTAATGATTATCTGGT
TAAGCCGTTTAATAAGCAGGAGCTCTCTGCACGAATTCAAGTGCATATTAATGCGAGTTTGTCGGAAAAACGTAGACAGG
AAAATGACTCATTGAGCGCAGAGCTTTCTCAGCGAGAAAAGGTTGAATCTTTGCTTCTAGAGACTCAAACCAAGCTTTTA
GAGCAACTCGAGAGCACCCCTGAAGCGATCGTTTGTATCAATGAAAACCACAAAATCACCTTTGCTAATAAGTCTGCAAC
TGAGTTATTAAAGCGCTCTATAGAGCAAGTTAAGCGCTCACAAATTGAAGAGTTTATAGCGCCCAAGCACTTGCAGTTTG
ATCAGCCACACCGCAGCATAGATATCGATATTTTTGTTGGTGAGACCAAACAGGTCATTGCCAGCGATATCTTCACCCTA
CCGCTAGAAACCGGCCTAAGAGGCATGATTATCTTCAATTCAGACCCTGATGATGCTAACCAACGCATCAACAATCTTGA
GGTCGCTTTAGATGCCTTGGCTAGTTATGCTTTTTCCGGAGATAAGTCTCAACTCGAAGAGCTTAAAGAGATGGGTGATG
AGTTTGCAGACTTAGTCGGGCAGTTGGATAACAGCAAAGACAGCAAACAGCAAAATATGCGACAGCTACTCGTAGACTGC
ATGTCATCAGCGCTTGAATATTGGGAAAACCACGATGGTAATACTAAGTTCAATTTCGCCGAGCAAAGCGGTCTATGGCG
TGTGTATCTCGATAGAAGCACCCTTCAAACGAGAACGTTGGACAAATATCTAAGAATAGAAACGCTACCGAAAACACCTC
GTTGGCGTACAGTACTCAATTCTCTAGACTTCATTCTTGCACATTCTGATCATGATGATGCCCAGCGAGCTCAAGTGGTC
GGATTAAGAGATCAGTTACAAAACTTAGTCACACAGTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (379-431)

• PAS fold (PAS) (881-929)

• Response regulator receiver domain (Response_reg) (728-840)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (578-685)

• His Kinase A (phospho-acceptor) domain (HisKA) (464-530)

3D structure

• AlphaFold DB: A0A4Y3I0J0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	56.79	100	0.569